RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SLC9A8Q9Y2E8 581 aa17.14■□□□□ 0.33
SPSB4-201ENST00000310546 MRPS7Q9Y2R9 242 aaKnown RBP17.14■□□□□ 0.33
SPSB4-201ENST00000310546 CCDC88CQ9P219 2028 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 TRBV4-1A0A0J9YWV2 114 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 NR2F6P10588 404 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 SRP9P49458 86 aaKnown RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 RAET1GQ6H3X3 334 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 OR52I1Q8NGK6 324 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 OR8D4Q8NGM9 314 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 SKA2Q8WVK7 121 aaPredicted RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 TMED9Q9BVK6 235 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 ADGRE3Q9BY15 652 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 LYARQ9NX58 379 aaKnown RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 GMEB2Q9UKD1 530 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 RAB23Q9ULC3 237 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 A0A0C4DFX4 3053 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 HEPACAM2A8MVW5 462 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 INSIG1O15503 277 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 OR56A5P0C7T3 313 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 ITGALP20701 1170 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 XCR1P46094 333 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 CAMK2DQ13557 499 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 SCARB2Q14108 478 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 NTRK2Q16620 822 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 OR8J2Q8NGG1 315 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 MTERF1Q99551 399 aaKnown RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 THAP7Q9BT49 309 aaPredicted RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 PRR14Q9BWN1 585 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 SORBS1Q9BX66 1292 aaKnown RBP17.13■□□□□ 0.33
SPSB4-201ENST00000310546 BEX1Q9HBH7 125 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 TRPM5Q9NZQ8 1165 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 PRSS21Q9Y6M0 314 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 SESN1Q9Y6P5 492 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
SPSB4-201ENST00000310546 TEX13CA0A0J9YWL9 993 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 PIPSLA2A3N6 862 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 POM121CA8CG34 1229 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 CCL5P13501 91 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 SELPP16109 830 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 ELK1P19419 428 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 AKR1D1P51857 326 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 TLE2Q04725 743 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 FTMTQ8N4E7 242 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 OR2T35Q8NGX2 323 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 OTULINQ96BN8 352 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 SCMH1Q96GD3 660 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 NLNQ9BYT8 704 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 SAP130Q9H0E3 1048 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 SLC32A1Q9H598 525 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 KCTD5Q9NXV2 234 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 OR10H3O60404 316 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 RGS11O94810 467 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 PLATP00750 562 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 RPIAP49247 311 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 XKP51811 444 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 LBX1P52954 281 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 WNT4P56705 351 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 CPTPQ5TA50 214 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 SERPINA9Q86WD7 417 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 OR4A15Q8NGL6 344 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 OR8J1Q8NGP2 316 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
SPSB4-201ENST00000310546 UFD1Q92890 307 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 PTP4A1Q93096 173 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 USB1Q9BQ65 265 aaKnown RBP17.12■□□□□ 0.33
SPSB4-201ENST00000310546 PCDHB16Q9NRJ7 776 aa17.12■□□□□ 0.33
SPSB4-201ENST00000310546 ALPK3Q96L96 1907 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 C2orf92A0A1B0GVN3 265 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 A8MVJ9 347 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 RAB36O95755 333 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 ANXA5P08758 320 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 OSMP13725 252 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 ZNF7P17097 686 aaPredicted RBP17.11■□□□□ 0.33
SPSB4-201ENST00000310546 TAF12Q16514 161 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 FAM26DQ5JW98 314 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 C17orf107Q6ZR85 190 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
SPSB4-201ENST00000310546 BMPERQ8N8U9 685 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 VPS37AQ8NEZ2 397 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 NEIL3Q8TAT5 605 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 MGME1Q9BQP7 344 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 THSD1Q9NS62 852 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 REV3LO60673 3130 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 SHISA3A0PJX4 238 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 C1orf226A1L170 272 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 M0QZQ0 153 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 EEF1E1O43324 174 aaKnown RBP17.11■□□□□ 0.33
SPSB4-201ENST00000310546 SSNA1O43805 119 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 TWF1Q12792 350 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
SPSB4-201ENST00000310546 FRG2Q64ET8 278 aa17.11■□□□□ 0.33
SPSB4-201ENST00000310546 PRSS55Q6UWB4 352 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms