RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NUP43Q8NFH3 380 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 SLCO4A1Q96BD0 722 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 DDX18Q9NVP1 670 aaKnown RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 SIDT1Q9NXL6 827 aaKnown RBP21.15■□□□□ 0.98
IRF3-201ENST00000309877 V9GYQ6 96 aa21.15■□□□□ 0.98
IRF3-201ENST00000309877 GPR179Q6PRD1 2367 aa21.14■□□□□ 0.98
IRF3-201ENST00000309877 OR10H2O60403 315 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 BMP10O95393 424 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 SERPINA1P01009 418 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 SLC35E2P0CK97 266 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 BMP2P12643 396 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 ANXA11P50995 505 aaKnown RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 SCARB2Q14108 478 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 DSG2Q14126 1118 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 ZNF630Q2M218 657 aaPredicted RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 TBCELQ5QJ74 424 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 ZC3H7AQ8IWR0 971 aaKnown RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 AGBL5Q8NDL9 886 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 FBXO30Q8TB52 745 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 POP5Q969H6 163 aaKnown RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 DCAF13Q9NV06 445 aaKnown RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 OCIAD1Q9NX40 245 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 THUMPD1Q9NXG2 353 aaKnown RBP21.14■□□□□ 0.97
IRF3-201ENST00000309877 TRPC4Q9UBN4 977 aa21.14■□□□□ 0.97
IRF3-201ENST00000309877 COL5A1P20908 1838 aaPredicted RBP21.13■□□□□ 0.97
IRF3-201ENST00000309877 RALGAPA1Q6GYQ0 2036 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 C4orf47A7E2U8 309 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 EFCAB7A8K855 629 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 PLOD2O00469 737 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 KDELR2P33947 212 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 MAGEA8P43361 318 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 KHKP50053 298 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 HSD17B7P56937 341 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 MRPS35P82673 323 aaKnown RBP21.13■□□□□ 0.97
IRF3-201ENST00000309877 LRRC23Q53EV4 343 aaPredicted RBP21.13■□□□□ 0.97
IRF3-201ENST00000309877 CCDC157Q569K6 752 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 ARHGAP40Q5TG30 622 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 RHBDD2Q6NTF9 364 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 PQLC1Q8N2U9 271 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 OR7G2Q8NG99 324 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 OR1F2PQ96R84 312 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 SEPHS2Q99611 448 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 UGT2B28Q9BY64 529 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 ARMC1Q9NVT9 282 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 C6orf203Q9P0P8 240 aaPredicted RBP21.13■□□□□ 0.97
IRF3-201ENST00000309877 PTGFRNQ9P2B2 879 aa21.13■□□□□ 0.97
IRF3-201ENST00000309877 LRP3O75074 770 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 SCRG1O75711 98 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 SLITRK5O94991 958 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 HMGN2P05204 90 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 ARAFP10398 606 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 CDK6Q00534 326 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 LASP1Q14847 261 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 ZNF628Q5EBL2 1059 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 INTS11Q5TA45 600 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 IRAK1BP1Q5VVH5 260 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 RNF111Q6ZNA4 994 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 RBM44Q6ZP01 1051 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 BPHLQ86WA6 291 aaPredicted RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 PPP1R3BQ86XI6 285 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 SLC30A8Q8IWU4 369 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 EID3Q8N140 333 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 NFKBIDQ8NI38 313 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 PPWD1Q96BP3 646 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 CDC6Q99741 560 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 OR51I1Q9H343 314 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 DMDP11532 3685 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 ADAMTS20P59510 1910 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 TMEM247A6NEH6 219 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 UPK1AO00322 258 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 HYAL3O43820 417 aaPredicted RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 CBFA2T3O75081 653 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 PTDSS1P48651 473 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 BTG2P78543 158 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 FAM98BQ52LJ0 330 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 RAB8BQ92930 207 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 RBM18Q96H35 190 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 YIPF4Q9BSR8 244 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 ALOXE3Q9BYJ1 711 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 IRF2BPLQ9H1B7 796 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 ANKRA2Q9H9E1 313 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 A4GALTQ9NPC4 353 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 EQTNQ9NQ60 294 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 OLAHQ9NV23 265 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 RPS6KA6Q9UK32 745 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 SAMD4AQ9UPU9 718 aaKnown RBP21.12■□□□□ 0.97
IRF3-201ENST00000309877 ANGPT4Q9Y264 503 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 HCN4Q9Y3Q4 1203 aa21.12■□□□□ 0.97
IRF3-201ENST00000309877 SPTBP11277 2137 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 C5orf58C9J3I9 102 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 HMGN4O00479 90 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 HNRNPRO43390 633 aaKnown RBP21.11■□□□□ 0.97
IRF3-201ENST00000309877 JRKO75564 520 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 HBQ1P09105 142 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 OR12D1P0DN82 309 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 CHRNB3Q05901 458 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 MFSD4BQ5TF39 518 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 PWWP2BQ6NUJ5 590 aa21.11■□□□□ 0.97
IRF3-201ENST00000309877 FAM111BQ6SJ93 734 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms