RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ITGA3P26006 1051 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 FRKP42685 505 aaPredicted RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 CCL11P51671 97 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 MRPS35P82673 323 aaKnown RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 RAPSNQ13702 412 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 SPRED3Q2MJR0 410 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 FAM174BQ3ZCQ3 159 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 SPANXN4Q5MJ08 99 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 OR4F3Q6IEY1 312 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 FAM111BQ6SJ93 734 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ZNF551Q7Z340 670 aaPredicted RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 SPATA21Q7Z572 469 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 KBTBD2Q8IY47 623 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 GALNT16Q8N428 558 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 MORN4Q8NDC4 146 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 SIMC1Q8NDZ2 872 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ZNF721Q8TF20 911 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 KAT2AQ92830 837 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 TESCQ96BS2 214 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 FBXL20Q96IG2 436 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 THOC3Q96J01 351 aaKnown RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 DUSP26Q9BV47 211 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 BHLHE41Q9C0J9 482 aaPredicted RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 MMP25Q9NPA2 562 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ATAD3AQ9NVI7 634 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 MAT2BQ9NZL9 334 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ZIM2Q9NZV7 527 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ZNF223Q9UK11 482 aaPredicted RBP12.01□□□□□ -0.49
APTX-201ENST00000309615 TRIM33Q9UPN9 1127 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 ERVK-19Q9WJR5 959 aa12.01□□□□□ -0.49
APTX-201ENST00000309615 DSPP15924 2871 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 DYRK3O43781 588 aa12□□□□□ -0.49
APTX-201ENST00000309615 IGKV3-11P04433 115 aa12□□□□□ -0.49
APTX-201ENST00000309615 ITGB2P05107 769 aa12□□□□□ -0.49
APTX-201ENST00000309615 PCSK2P16519 638 aa12□□□□□ -0.49
APTX-201ENST00000309615 SSTR4P31391 388 aa12□□□□□ -0.49
APTX-201ENST00000309615 KIR3DL1P43629 444 aa12□□□□□ -0.49
APTX-201ENST00000309615 ZFP36L2P47974 494 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 DGKQP52824 942 aa12□□□□□ -0.49
APTX-201ENST00000309615 STX1BP61266 288 aa12□□□□□ -0.49
APTX-201ENST00000309615 PHC1P78364 1004 aa12□□□□□ -0.49
APTX-201ENST00000309615 HSPB3Q12988 150 aa12□□□□□ -0.49
APTX-201ENST00000309615 TRMT12Q53H54 448 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 ZNF628Q5EBL2 1059 aa12□□□□□ -0.49
APTX-201ENST00000309615 METTL21CQ5VZV1 264 aa12□□□□□ -0.49
APTX-201ENST00000309615 VWA5B2Q8N398 1253 aa12□□□□□ -0.49
APTX-201ENST00000309615 OR8J2Q8NGG1 315 aa12□□□□□ -0.49
APTX-201ENST00000309615 OR1N1Q8NGS0 311 aa12□□□□□ -0.49
APTX-201ENST00000309615 M1APQ8TC57 530 aa12□□□□□ -0.49
APTX-201ENST00000309615 ELP5Q8TE02 316 aa12□□□□□ -0.49
APTX-201ENST00000309615 CTHRC1Q96CG8 243 aa12□□□□□ -0.49
APTX-201ENST00000309615 ZBED6CLQ96FA7 236 aaPredicted RBP12□□□□□ -0.49
APTX-201ENST00000309615 ZBTB18Q99592 522 aa12□□□□□ -0.49
APTX-201ENST00000309615 NUDT9Q9BW91 350 aa12□□□□□ -0.49
APTX-201ENST00000309615 EPN3Q9H201 632 aa12□□□□□ -0.49
APTX-201ENST00000309615 ZNF385DQ9H6B1 395 aa12□□□□□ -0.49
APTX-201ENST00000309615 ANKRA2Q9H9E1 313 aa12□□□□□ -0.49
APTX-201ENST00000309615 PKD1L2Q7Z442 2459 aa12□□□□□ -0.49
APTX-201ENST00000309615 TRBV11-1A0A0K0K1C0 115 aa12□□□□□ -0.49
APTX-201ENST00000309615 SNX3O60493 162 aa12□□□□□ -0.49
APTX-201ENST00000309615 SHOX2O60902 331 aaPredicted RBP12□□□□□ -0.49
APTX-201ENST00000309615 CLPSP04118 112 aa12□□□□□ -0.49
APTX-201ENST00000309615 CD1EP15812 388 aa12□□□□□ -0.49
APTX-201ENST00000309615 DDX5P17844 614 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 S1PR1P21453 382 aa12□□□□□ -0.49
APTX-201ENST00000309615 MRPL19P49406 292 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 MANFP55145 182 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 WNT3P56703 355 aa12□□□□□ -0.49
APTX-201ENST00000309615 SRSF11Q05519 484 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 MAP4K2Q12851 820 aa12□□□□□ -0.49
APTX-201ENST00000309615 TMEM107Q6UX40 140 aa12□□□□□ -0.49
APTX-201ENST00000309615 ZNF675Q8TD23 568 aa12□□□□□ -0.49
APTX-201ENST00000309615 BRIX1Q8TDN6 353 aaKnown RBP12□□□□□ -0.49
APTX-201ENST00000309615 PSMF1Q92530 271 aa12□□□□□ -0.49
APTX-201ENST00000309615 VMP1Q96GC9 406 aa12□□□□□ -0.49
APTX-201ENST00000309615 SEMA4CQ9C0C4 833 aa12□□□□□ -0.49
APTX-201ENST00000309615 ACSS1Q9NUB1 689 aaPredicted RBP12□□□□□ -0.49
APTX-201ENST00000309615 CROCCQ5TZA2 2017 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 A0A1W2PRB8 838 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 PRKNO60260 465 aaPredicted RBP11.99□□□□□ -0.49
APTX-201ENST00000309615 PGRP06401 933 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 S100A3P33764 101 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 ATP4BP51164 291 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 SOX8P57073 446 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 FUT7Q11130 342 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 SQLEQ14534 574 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
APTX-201ENST00000309615 DPY19L1Q2PZI1 675 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 ANKRD46Q86W74 232 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 FUNDC1Q8IVP5 155 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 CLECL1Q8IZS7 167 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 SIRT6Q8N6T7 355 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 GLB1L3Q8NCI6 653 aaPredicted RBP11.99□□□□□ -0.49
APTX-201ENST00000309615 FDCSPQ8NFU4 85 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 OR7G2Q8NG99 324 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 LHPPQ9H008 270 aa11.99□□□□□ -0.49
APTX-201ENST00000309615 GPR83Q9NYM4 423 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms