RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 HS3ST1O14792 307 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 IPO7O95373 1038 aaKnown RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 TGM6O95932 706 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 PLAUP00749 431 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 CRHP06850 196 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 GNAZP19086 355 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 ACVR1BP36896 505 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 CASP3P42574 277 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 CDKN2DP55273 166 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SARNPP82979 210 aaKnown RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 PLIN5Q00G26 463 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 TGM3Q08188 693 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 HSP90AA5PQ58FG0 334 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 BEX5Q5H9J7 111 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 RBM20Q5T481 1227 aaKnown RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 C6orf52Q5T4I8 152 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 ANKRD34AQ69YU3 496 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 ADNP2Q6IQ32 1131 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SBSNQ6UWP8 590 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 ANGPTL8Q6UXH0 198 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SH2D5Q6ZV89 423 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 GSTA5Q7RTV2 222 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 P4HA3Q7Z4N8 544 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 VN1R5Q7Z5H4 357 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 KRT78Q8N1N4 520 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 OR1J4Q8NGS1 313 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 TRMT61AQ96FX7 289 aaKnown RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 HES6Q96HZ4 224 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 F2RL3Q96RI0 385 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 KRT12Q99456 494 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 SLC39A3Q9BRY0 314 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 BEX2Q9BXY8 128 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 LRTM1Q9HBL6 345 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 EPN1Q9Y6I3 576 aaPredicted RBP10.72□□□□□ -0.69
SMIM4-201ENST00000307106 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
SMIM4-201ENST00000307106 MAGEB16A2A368 324 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 OR6C76A6NM76 312 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 PLOD2O00469 737 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 KLF4O43474 513 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 WDR47O94967 919 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 CPN2P22792 545 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 KCNC1P48547 511 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 STARP49675 285 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 TMED10P49755 219 aaKnown RBP10.71□□□□□ -0.69
SMIM4-201ENST00000307106 SLC37A1P57057 533 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 RPP38P78345 283 aaKnown RBP10.71□□□□□ -0.69
SMIM4-201ENST00000307106 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
SMIM4-201ENST00000307106 OR2A2Q6IF42 318 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 ZNF793Q6ZN11 406 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 TRIM42Q8IWZ5 723 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 BBOF1Q8ND07 529 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 OR14L1PQ8NHC6 308 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 CAVIN3Q969G5 261 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 CTHRC1Q96CG8 243 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 KCNC2Q96PR1 638 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 FAM167BQ9BTA0 163 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 ROGDIQ9GZN7 287 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 SLCO5A1Q9H2Y9 848 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 NT5DC2Q9H857 520 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 SNX15Q9NRS6 342 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 IARS2Q9NSE4 1012 aaKnown RBP10.71□□□□□ -0.69
SMIM4-201ENST00000307106 WWOXQ9NZC7 414 aa10.71□□□□□ -0.69
SMIM4-201ENST00000307106 REXO2Q9Y3B8 237 aaKnown RBP10.71□□□□□ -0.69
SMIM4-201ENST00000307106 C2orf92A0A1B0GVN3 265 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 FRG2CA6NGY1 282 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 OVOL3O00110 214 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 RTCAO00442 366 aaKnown RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 HCRTR2O43614 444 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 GPRIN2O60269 458 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ADAM11O75078 769 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 CDH16O75309 829 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ALOX15P16050 662 aaPredicted RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ATP5A1P25705 553 aaKnown RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 THBS2P35442 1172 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 PGGT1BP53609 377 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 SIRPAP78324 504 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 BIKQ13323 160 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ZNF267Q14586 743 aaPredicted RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 SETDB1Q15047 1291 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 CCNG2Q16589 344 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 PPP1R3AQ16821 1122 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 SPRED3Q2MJR0 410 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 MILR1Q7Z6M3 343 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 IFNEQ86WN2 208 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ACOT4Q8N9L9 421 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 C2CD4AQ8NCU7 369 aaPredicted RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 RDH11Q8TC12 318 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 ROBO4Q8WZ75 1007 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 AKAP1Q92667 903 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 TP53INP1Q96A56 240 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 KLHL4Q9C0H6 718 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 OR2B2Q9GZK3 357 aa10.7□□□□□ -0.7
SMIM4-201ENST00000307106 PITHD1Q9GZP4 211 aaPredicted RBP10.7□□□□□ -0.7
SMIM4-201ENST00000307106 RPF2Q9H7B2 306 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms