RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 KAT2AQ92830 837 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MAT2BQ9NZL9 334 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 BTNL2Q9UIR0 455 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 DYTNA2CJ06 578 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 SYNDIG1LA6NDD5 238 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 HRKO00198 91 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 ANGPT2O15123 496 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 SEC24DO94855 1032 aaPredicted RBP25.34■■□□□ 1.65
HDAC3-201ENST00000305264 MGAT2Q10469 447 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 TERF2Q15554 542 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 FAM111BQ6SJ93 734 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 TMEM107Q6UX40 140 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 DNAJC14Q6Y2X3 702 aaPredicted RBP25.34■■□□□ 1.65
HDAC3-201ENST00000305264 MRGPREQ86SM8 312 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 OR11G2Q8NGC1 345 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 OR4A15Q8NGL6 344 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 OR5P2Q8WZ92 322 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 GTF2H4Q92759 462 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 SIRT3Q9NTG7 399 aaPredicted RBP25.34■■□□□ 1.65
HDAC3-201ENST00000305264 ARL8BQ9NVJ2 186 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 NDUFAF1Q9Y375 327 aa25.34■■□□□ 1.65
HDAC3-201ENST00000305264 CPSF4O95639 269 aaKnown RBP25.33■■□□□ 1.65
HDAC3-201ENST00000305264 COX6A1P12074 109 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 TNNI3P19429 210 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 CDKN2CP42773 168 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 PGDP52209 483 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 PCOLCEQ15113 449 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 ATP1A1-AS1Q5TC04 95 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 PAPD4Q6PIY7 484 aaKnown RBP25.33■■□□□ 1.65
HDAC3-201ENST00000305264 RP9Q8TA86 221 aaKnown RBP25.33■■□□□ 1.65
HDAC3-201ENST00000305264 DPH1Q9BZG8 443 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 TRIM4Q9C037 500 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 RMND5AQ9H871 391 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 ANKRA2Q9H9E1 313 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.33■■□□□ 1.65
HDAC3-201ENST00000305264 CLCA3PQ9Y6N3 262 aa25.33■■□□□ 1.65
HDAC3-201ENST00000305264 IGHV1-45A0A0A0MS14 117 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 PCDH17O14917 1159 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 GPC1P35052 558 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 MC3RP41968 323 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 C6orf10Q5SRN2 563 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 UNQ6494/PRO21346Q6UXR6 183 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 C7orf57Q8NEG2 295 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF675Q8TD23 568 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 CXorf36Q9H7Y0 433 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 TAS2R9Q9NYW1 312 aa25.33■■□□□ 1.64
HDAC3-201ENST00000305264 LEF1Q9UJU2 399 aaPredicted RBP25.33■■□□□ 1.64
HDAC3-201ENST00000305264 GALNSP34059 522 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 SPRED3Q2MJR0 410 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 REP15Q6BDI9 236 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 RAB43Q86YS6 212 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 VWA5B2Q8N398 1253 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 SIMC1Q8NDZ2 872 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 OR7G2Q8NG99 324 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 ITCHQ96J02 903 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 PANX1Q96RD7 426 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 NEUROD4Q9HD90 331 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 SLC6A13Q9NSD5 602 aa25.32■■□□□ 1.64
HDAC3-201ENST00000305264 A0A1W2PQ72 361 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 SAGE2PA6NJ88 616 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 EIF2S3P41091 472 aaKnown RBP25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF267Q14586 743 aaPredicted RBP25.31■■□□□ 1.64
HDAC3-201ENST00000305264 TRMT12Q53H54 448 aaKnown RBP25.31■■□□□ 1.64
HDAC3-201ENST00000305264 OR14A16Q8NHC5 309 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 PSMA8Q8TAA3 256 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 NACC2Q96BF6 587 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 CTHRC1Q96CG8 243 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 CMTM5Q96DZ9 223 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 LPAR4Q99677 370 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 NPAS2Q99743 824 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 CNPPD1Q9BV87 410 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF700Q9H0M5 742 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 SLAMF8Q9P0V8 285 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ERVK-19Q9WJR5 959 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 MAN2B2Q9Y2E5 1009 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 SNX8Q9Y5X2 465 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 RFXANKO14593 260 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 CBX6O95503 412 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 DDAH2O95865 285 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 GSNP06396 782 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 PRDX6P30041 224 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 GAB1Q13480 694 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ATP1A4Q13733 1029 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ZNF321PQ8N8H1 164 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 RCN3Q96D15 328 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 ELP4Q96EB1 424 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 DCBLD2Q96PD2 775 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 CCNL2Q96S94 520 aaPredicted RBP25.31■■□□□ 1.64
HDAC3-201ENST00000305264 P4HTMQ9NXG6 502 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 FBXL4Q9UKA2 621 aa25.31■■□□□ 1.64
HDAC3-201ENST00000305264 URB1O60287 2271 aaKnown RBP25.3■■□□□ 1.64
HDAC3-201ENST00000305264 NKX2-8O15522 239 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 EFSO43281 561 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 LRRC74AQ0VAA2 488 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 MAP4K2Q12851 820 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 KRT72Q14CN4 511 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 SPACA3Q8IXA5 215 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 CLEC4FQ8N1N0 589 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 SLC2A12Q8TD20 617 aa25.3■■□□□ 1.64
HDAC3-201ENST00000305264 DAZLQ92904 295 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms