RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SRPX2O60687 465 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 GNAO1P09471 354 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 CDH2P19022 906 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 RRM2P31350 389 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 ITGA1P56199 1179 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 HPCAP84074 193 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 RFX4Q33E94 735 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 RASSF5Q8WWW0 418 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 RDH12Q96NR8 316 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 GALR3O60755 368 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 RDH16O75452 317 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 GCM2O75603 506 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 BMP10O95393 424 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 IFNW1P05000 195 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PORP16435 677 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 IGFBP5P24593 272 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 EEF1A2Q05639 463 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 BNIP3Q12983 259 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 LTB4RQ15722 352 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 OR5T3Q8NGG3 340 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 TBC1D20Q96BZ9 403 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 ELP4Q96EB1 424 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 KCMF1Q9P0J7 381 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PADI2Q9Y2J8 665 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PCDHGB3Q9Y5G1 929 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PLOD2O00469 737 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 NT5EP21589 574 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 MYBPC1Q00872 1141 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 DUSP2Q05923 314 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 SYPL1Q16563 259 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 SNAP47Q5SQN1 464 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 C16orf62Q7Z3J2 963 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 PIWIL3Q7Z3Z3 882 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 TMEM179BQ7Z7N9 219 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 TAGAPQ8N103 731 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 OR9A4Q8NGU2 314 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 SPATA5L1Q9BVQ7 753 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 ZNF451Q9Y4E5 1061 aa13.66□□□□□ -0.22
SHCBP1-201ENST00000303383 TLCD2A6NGC4 264 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 H0YAE9 185 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 TNFRSF11BO00300 401 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 DLGAP1O14490 977 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 B4GALT2O60909 372 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 LDB3O75112 727 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 CLPTM1O96005 669 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 MYF6P23409 242 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 GFERP55789 205 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 EXD2Q9NVH0 621 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 SLC13A4Q9UKG4 626 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 NINQ8N4C6 2090 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 MYOCOSA0A1B0GUC4 107 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 CRYBA2P53672 197 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 ZXDAP98168 799 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 OGFOD3Q6PK18 319 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 GALNT5Q7Z7M9 940 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 VNN3Q9NY84 501 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 PLCL2Q9UPR0 1127 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 MRPS33Q9Y291 106 aaKnown RBP13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 RNF215Q9Y6U7 377 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
SHCBP1-201ENST00000303383 A0A0A6YYC8 382 aaPredicted RBP13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 I3L1I5 382 aaPredicted RBP13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 CPMP14384 443 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 MAGEA8P43361 318 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 CDH12P55289 794 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 METTL25Q8N6Q8 603 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 OR52J3Q8NH60 311 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 SLC9A6Q92581 669 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 C7orf34Q96L11 122 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 ZNF681Q96N22 645 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 TREX2Q9BQ50 279 aaPredicted RBP13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 ANKRA2Q9H9E1 313 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 USE1Q9NZ43 259 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 SUSD2Q9UGT4 822 aa13.65□□□□□ -0.23
SHCBP1-201ENST00000303383 SPTBP11277 2137 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 DUX1O43812 170 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 DNAJB6O75190 326 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 H6PDO95479 791 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 SEMG1P04279 462 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 SEPHS1P49903 392 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 C8orf59Q8N0T1 100 aaPredicted RBP13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 KLHL6Q8WZ60 621 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 TANKQ92844 425 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 C16orf58Q96GQ5 468 aa13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 ELF4Q99607 663 aaPredicted RBP13.64□□□□□ -0.23
SHCBP1-201ENST00000303383 RIBC2Q9H4K1 309 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms