RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 PBX2P40425 430 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RCAN2Q14206 197 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 RAB35Q15286 201 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SFRP4Q6FHJ7 346 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 NLRP8Q86W28 1048 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 OR4K14Q8NGD5 310 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ZNF641Q96N77 438 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM59Q9BXS4 323 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 A0A1W2PPW3 197 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 SERPINE2P07093 398 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 GRB7Q14451 532 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 HES1Q14469 280 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 WDR53Q7Z5U6 358 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 FJX1Q86VR8 437 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 OR52E2Q8NGJ4 325 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 FAM71F1Q96KD3 344 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ZNF358Q9NW07 568 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 OR14J1Q9UGF5 321 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 CD300LBA8K4G0 201 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ACOT11Q8WXI4 607 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-201ENST00000303296 ADAM19Q9H013 955 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
HIPK3-201ENST00000303296 CBSLP0DN79 551 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CKMT2P17540 419 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CBSP35520 551 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 GDF5P43026 501 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 YBEYP58557 167 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 RAB11BQ15907 218 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZFP41Q8N8Y5 198 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 BPIFCQ8NFQ6 507 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 OR4K1Q8NGD4 311 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF514Q96K75 400 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 SMG9Q9H0W8 520 aaKnown RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 IL17RBQ9NRM6 502 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 RPS24P62847 133 aaKnown RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 IL10RBQ08334 325 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZFPM1Q8IX07 1006 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ELF4Q99607 663 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 G6PC3Q9BUM1 346 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 RNF32Q9H0A6 362 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 GPR34Q9UPC5 381 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 AP1G1O43747 822 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CLDN7O95471 211 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 TBX18O95935 607 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ALDOBP05062 364 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CREB1P16220 341 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 HTR2BP41595 481 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 GID4Q8IVV7 300 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF679Q8IYX0 411 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 DMBX1Q8NFW5 382 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 SLC35F5Q8WV83 523 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 OPA3Q9H6K4 179 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 STXBP5LQ9Y2K9 1186 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PCDHAC2Q9Y5I4 1007 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 JCADQ9P266 1359 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CHRNA1P02708 482 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PMPCAQ10713 525 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 AGAP7PQ5VUJ5 663 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 AGAP6Q5VW22 663 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CMIPQ8IY22 773 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 STT3BQ8TCJ2 826 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 AGAP4Q96P64 663 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 NUP153P49790 1475 aaKnown RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 LOC730098B7Z3J9 87 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 OR10J4P0C629 311 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 JUNDP17535 347 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 UBE2G2P60604 165 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 KHDC1Q4VXA5 237 aaKnown RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PDZD9Q8IXQ8 264 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PLD5Q8N7P1 536 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ASTN1O14525 1302 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 SDK1Q7Z5N4 2213 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 IL7P13232 177 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 BPIP17213 487 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PITPNBP48739 271 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 C1orf61Q13536 156 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF542PQ5EBM4 170 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-201ENST00000303296 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ZNRF4Q8WWF5 429 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
HIPK3-201ENST00000303296 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 RETP07949 1114 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 NRIP1P48552 1158 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 TRAM2Q15035 370 aa13.63□□□□□ -0.23
HIPK3-201ENST00000303296 ZNF776Q68DI1 518 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms