RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 COX6A1P12074 109 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 MPIP34949 423 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 RPS15P62841 145 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MRPS35P82673 323 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 PLIN5Q00G26 463 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 FUT7Q11130 342 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GAB1Q13480 694 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 SERTAD2Q14140 314 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GTDC1Q4AE62 458 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 SFT2D3Q587I9 215 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 LRIF1Q5T3J3 769 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 C8orf82Q6P1X6 216 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MSANTD1Q6ZTZ1 278 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GPR155Q7Z3F1 870 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CPEB2Q7Z5Q1 589 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 CLEC4FQ8N1N0 589 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 LRRC25Q8N386 305 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 DPP10Q8N608 796 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 OR11G2Q8NGC1 345 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 RP9Q8TA86 221 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF675Q8TD23 568 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 OR5P2Q8WZ92 322 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ELP4Q96EB1 424 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NAF1Q96HR8 494 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 PRPF18Q99633 342 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 NPAS2Q99743 824 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF700Q9H0M5 742 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ATAD3AQ9NVI7 634 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GPATCH2Q9NW75 528 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF223Q9UK11 482 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 ANGPTL2Q9UKU9 493 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF780BQ9Y6R6 833 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NUP214P35658 2090 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 A8MUA0 341 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 UPK1AO00322 258 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CFLARO15519 480 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NKX2-8O15522 239 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PLOD3O60568 738 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 UBOX5O94941 541 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CBX7O95931 251 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZCCHC18P0CG32 403 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PRDX6P30041 224 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 EIF2S3P41091 472 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MAP3K8P41279 467 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 FOLR3P41439 243 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NCBP2P52298 156 aaKnown RBP eCLIP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MVDP53602 400 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 MANFP55145 182 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 KCNK10P57789 538 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 Q0VFX4 171 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 STX4Q12846 297 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 BIKQ13323 160 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 CYLC2Q14093 348 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 ELAVL1Q15717 326 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MAPKAPK3Q16644 382 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 EXOSC6Q5RKV6 272 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 ATP1A1-AS1Q5TC04 95 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 MFSD4BQ5TF39 518 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ANXA8L1Q5VT79 327 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 SAMD14Q8IZD0 417 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 C10orf111Q8N326 155 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 OR2L13Q8N349 312 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NATD1Q8N6N6 113 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF615Q8N8J6 731 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 APCDD1LQ8NCL9 501 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZNF721Q8TF20 911 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 KAT2AQ92830 837 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NACC2Q96BF6 587 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GIMAP5Q96F15 307 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZBED6CLQ96FA7 236 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 SENP5Q96HI0 755 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 BBS4Q96RK4 519 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 ZBTB18Q99592 522 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 SLC25A23Q9BV35 468 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 IKZF5Q9H5V7 419 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GPN2Q9H9Y4 310 aaPredicted RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 ADAP2Q9NPF8 381 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PNO1Q9NRX1 252 aaKnown RBP8.85□□□□□ -0.99
RFX3-201ENST00000302303 MRGBPQ9NV56 204 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 TAS2R9Q9NYW1 312 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 VAPAQ9P0L0 249 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 KCND3Q9UK17 655 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 NDUFAF1Q9Y375 327 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 PCDHB14Q9Y5E9 798 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 GMEB1Q9Y692 573 aa8.85□□□□□ -0.99
RFX3-201ENST00000302303 A0A087WV62 115 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 TMEM200CA6NKL6 621 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 C17orf105B2RV13 164 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 PRKNO60260 465 aaPredicted RBP8.84□□□□□ -0.99
RFX3-201ENST00000302303 GSNP06396 782 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 CELA2AP08217 269 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 IFI6P09912 130 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 SSTR4P31391 388 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 CPOXP36551 454 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 MC3RP41968 323 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 CPA2P48052 419 aa8.84□□□□□ -0.99
RFX3-201ENST00000302303 TRPC1P48995 793 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms