RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CDK1P06493 297 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ZNF30P17039 623 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 CD72P21854 359 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 CHMP24386 653 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 CCR8P51685 355 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 LRRC32Q14392 662 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 SLC9A5Q14940 896 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 KDM4DQ6B0I6 523 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
SDC2-201ENST00000302190 BHLHB9Q6PI77 547 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 PAQR6Q6TCH4 344 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 ZNF783Q6ZMS7 281 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 DNAJC22Q8N4W6 341 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 OR4E2Q8NGC2 313 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 UFD1Q92890 307 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 RDH14Q9HBH5 336 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 CUEDC1Q9NWM3 386 aaPredicted RBP13.36□□□□□ -0.27
SDC2-201ENST00000302190 P2RX2Q9UBL9 471 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 HSPB11Q9Y547 144 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
SDC2-201ENST00000302190 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SDC2-201ENST00000302190 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FAM172BPA6NC97 362 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FAM183AA6NL82 134 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 MPZL2O60487 215 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 TNFSF8P32971 234 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 PIK3CBP42338 1070 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 IFITM2Q01629 132 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 STX4Q12846 297 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 SP140Q13342 867 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 MTFR2Q6P444 385 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 TMEM107Q6UX40 140 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 AP3S1Q92572 193 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 CXorf40BQ96DE9 158 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 PSD2Q9BQI7 771 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 ALOXE3Q9BYJ1 711 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 OR51I1Q9H343 314 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 NLKQ9UBE8 527 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 DPP7Q9UHL4 492 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 OR52A4PA6NMU1 304 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 CD160O95971 181 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 ATP12AP54707 1039 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 B4GALNT1Q00973 533 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 ZNF45Q02386 682 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 DBPQ10586 325 aaPredicted RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 WSCD2Q2TBF2 565 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 LMLNQ96KR4 655 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 RSPH9Q9H1X1 276 aaPredicted RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 C3orf14Q9HBI5 128 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FZD3Q9NPG1 666 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FKBP14Q9NWM8 211 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 FBXO10Q9UK96 956 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 C6P13671 934 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 ZNF385BQ569K4 471 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 GRHL2Q6ISB3 625 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 KIAA1324Q6UXG2 1013 aaKnown RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 LSRQ86X29 649 aaPredicted RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
SDC2-201ENST00000302190 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 RPS6KB2Q9UBS0 482 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 CCDC88CQ9P219 2028 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
SDC2-201ENST00000302190 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ARHGEF15O94989 841 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 F11P03951 625 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ITGAMP11215 1152 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 SDC2P34741 201 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 SLC9A3P48764 834 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 BTN3A2P78410 334 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 RAB33AQ14088 237 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 VEZF1Q14119 521 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 NXPE4Q6UWF7 544 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 VITQ6UXI7 678 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ZNF717Q9BY31 904 aaPredicted RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 HOXD1Q9GZZ0 328 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ADAM30Q9UKF2 790 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 PGRMC2O15173 223 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 CAPN5O15484 640 aaPredicted RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 NUDT14O95848 222 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 MPC1LP0DKB6 136 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ADH5P11766 374 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 JUNBP17275 347 aaPredicted RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 HYAL2Q12891 473 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms