RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 HORMAD2Q8N7B1 307 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 NLGN4YQ8NFZ3 816 aaPredicted RBP12.66□□□□□ -0.38
CASC4-201ENST00000299957 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 ENAMQ9NRM1 1142 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 TM7SF3Q9NS93 570 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 CDH7Q9ULB5 785 aa12.66□□□□□ -0.38
CASC4-201ENST00000299957 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 LOC105369274A0A096LPK9 316 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 C6P13671 934 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 HMGA1P17096 107 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 RHCEP18577 417 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 IMPA1P29218 277 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 PLAG1Q6DJT9 500 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 NXPE4Q6UWF7 544 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 AMIGO1Q86WK6 493 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 PEX5LQ8IYB4 626 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 OR4N4Q8N0Y3 316 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 OR4C6Q8NH72 309 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 SIPA1Q96FS4 1042 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 MROQ9BYG7 248 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ALOXE3Q9BYJ1 711 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 WDR26Q9H7D7 661 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 PCDHGA6Q9Y5G7 932 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 AHCTF1Q8WYP5 2266 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 LOC100509620A0A075B734 347 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 A8MUA0 341 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 K7ESM1 405 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ZNF821O75541 412 aaPredicted RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 APEX1P27695 318 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 HTR2BP41595 481 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 KEAP1Q14145 624 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 CTF1Q16619 201 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 NDUFAF6Q330K2 333 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ZMAT1Q5H9K5 638 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 TOR1AIP1Q5JTV8 583 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 MLIPQ5VWP3 458 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 SLC27A4Q6P1M0 643 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 LYSMD2Q8IV50 215 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 METTL27Q8N6F8 245 aaPredicted RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 MINDY2Q8NBR6 621 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 FIBINQ8TAL6 211 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 POP5Q969H6 163 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 COQ8BQ96D53 544 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 DPH7Q9BTV6 452 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ABCG5Q9H222 651 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 MOV10Q9HCE1 1003 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 CCDC88CQ9P219 2028 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 BTNL2Q9UIR0 455 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 SNX11Q9Y5W9 270 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 GRXCR1A8MXD5 290 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 SSX4O60224 188 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ADH5P11766 374 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 HOXB6P17509 224 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 MPIP34949 423 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 GCGRP47871 477 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 MAN2A2P49641 1150 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 RGS1Q08116 209 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 SLC8B1Q6J4K2 584 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 TRIM46Q7Z4K8 759 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 LRRTM4Q86VH4 590 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 RERGQ96A58 199 aaPredicted RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 ECHDC3Q96DC8 303 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 FYTTD1Q96QD9 318 aaKnown RBP12.65□□□□□ -0.38
CASC4-201ENST00000299957 WDR45Q9Y484 360 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 LOXHD1Q8IVV2 1947 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
CASC4-201ENST00000299957 PPM1DO15297 605 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 MID1O15344 667 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 OR6A2O95222 327 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 TYRP1P17643 537 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 GNA13Q14344 377 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 MINDY4Q4G0A6 757 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 PLBD1Q6P4A8 553 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ENPP7Q6UWV6 458 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 GALNT7Q86SF2 657 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 NRMQ8IXM6 262 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 RFKQ969G6 155 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 TMEFF2Q9UIK5 374 aaPredicted RBP12.64□□□□□ -0.39
CASC4-201ENST00000299957 SVILO95425 2214 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 A0A1W2PP55 124 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CTSEP14091 401 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 GNSP15586 552 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ZNF30P17039 623 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CLDN2P57739 230 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 PFN3P60673 137 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 GRSF1Q12849 480 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms