RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
CTDP1-202ENST00000299543 NPIPB8E9PQR5 432 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ENTPD6O75354 484 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 SOX6P35712 828 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 PNLIPRP1P54315 467 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 FRMPD2BQ6IN97 320 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ATP6V1HQ9UI12 483 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ENPP4Q9Y6X5 453 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 LATO43561 262 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 SLC28A2O43868 658 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 IL7P13232 177 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 DDCP20711 480 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 MMP12P39900 470 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 CRISP1P54107 249 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 WDR5P61964 334 aaKnown RBP12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TARDBPQ13148 414 aaKnown RBP eCLIP12.77□□□□□ -0.374e-6■■■■□ 19.5
CTDP1-202ENST00000299543 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
CTDP1-202ENST00000299543 BAK1Q16611 211 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF630Q2M218 657 aaPredicted RBP12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TCEANCQ8N8B7 351 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 UCN3Q969E3 161 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TMEM19Q96HH6 336 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 ZBP1Q9H171 429 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 OSGEPL1Q9H4B0 414 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TM7SF3Q9NS93 570 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 SNTG1Q9NSN8 517 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TVP23BQ9NYZ1 205 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 TAAR2Q9P1P5 351 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 SLC23A1Q9UHI7 598 aa12.77□□□□□ -0.37
CTDP1-202ENST00000299543 SCN8AQ9UQD0 1980 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 ADRA2AP08913 450 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 ITGB8P26012 769 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 PPM1AP35813 382 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 REEP3Q6NUK4 255 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 MARC2Q969Z3 335 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 NUS1Q96E22 293 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 MRGPRX3Q96LB0 322 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 SPATA9Q9BWV2 254 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 KCNK12Q9HB15 430 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 CUEDC1Q9NWM3 386 aaPredicted RBP12.76□□□□□ -0.37
CTDP1-202ENST00000299543 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 PPM1DO15297 605 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 FKTNO75072 461 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 DDOSTP39656 456 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 PIK3CBP42338 1070 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 LIM2P55344 173 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 PIN1Q13526 163 aaPredicted RBP12.76□□□□□ -0.37
CTDP1-202ENST00000299543 FAM71E1Q6IPT2 247 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 DPPA4Q7L190 304 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 DENND6BQ8NEG7 585 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 OR5D16Q8NGK9 328 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 SLC38A5Q8WUX1 472 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 SEMA3GQ9NS98 782 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 SEC14L3Q9UDX4 400 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 MAPRE3Q9UPY8 281 aa12.76□□□□□ -0.37
CTDP1-202ENST00000299543 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 KCNJ13O60928 360 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 NME6O75414 186 aaPredicted RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 ERAL1O75616 437 aaKnown RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PCSK2P16519 638 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SDHBP21912 280 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 VIPR2P41587 438 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 XCR1P46094 333 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 DCDC1P59894 354 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 DCST1Q5T197 706 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 FAM83HQ6ZRV2 1179 aaPredicted RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SFTPA1Q8IWL2 248 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 OR4C15Q8NGM1 316 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 OR2A14Q96R47 310 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 DYRK4Q9NR20 520 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PCYT1BQ9Y5K3 369 aaPredicted RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 EFCAB10A6NFE3 127 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 TLR4O00206 839 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 C6P13671 934 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PTNP21246 168 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 ZNF33BQ06732 778 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 RBBP4Q09028 425 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 GRM7Q14831 915 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 GPAT3Q53EU6 434 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 PAQR6Q6TCH4 344 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 C17orf64Q86WR6 236 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 C12orf40Q86WS4 652 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 SLC7A6Q92536 515 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 TFGQ92734 400 aaPredicted RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 VWCEQ96DN2 955 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 TOE1Q96GM8 510 aaKnown RBP12.75□□□□□ -0.37
CTDP1-202ENST00000299543 WFDC6Q9BQY6 131 aa12.75□□□□□ -0.37
CTDP1-202ENST00000299543 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms