RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 MRPS30Q9NP92 439 aaKnown RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 C1GALT1Q9NS00 363 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 QPCTLQ9NXS2 382 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 MARK1Q9P0L2 795 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 BTNL2Q9UIR0 455 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PRRC2CQ9Y520 2896 aaKnown RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CASC3O15234 703 aaKnown RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 SSX4O60224 188 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PRMT3O60678 531 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CTSBP07858 339 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 FCARP24071 287 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 CD40LGP29965 261 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 ERVK-21P61565 698 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 DOC2BQ14184 412 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 SEC23BQ15437 767 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 C10orf62Q5T681 223 aaPredicted RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 OR52N2Q8NGI0 321 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 REPS1Q96D71 796 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 SGPP1Q9BX95 441 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 OR51I1Q9H343 314 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 NECTIN3Q9NQS3 549 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 ACER3Q9NUN7 267 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 TVP23BQ9NYZ1 205 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 PSORS1C1Q9UIG5 152 aa12.81□□□□□ -0.36
TTC39B-201ENST00000297615 MDC1Q14676 2089 aaKnown RBP12.81□□□□□ -0.36
TTC39B-201ENST00000297615 TRIM64BA6NI03 449 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 A8MV72 311 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 RNASET2O00584 256 aaKnown RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ZW10O43264 779 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ENTPD6O75354 484 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TNFRSF21O75509 655 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SPNP16150 400 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CHMP24386 653 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CDC42P60953 191 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 OXA1LQ15070 435 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TAB1Q15750 504 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TJAP1Q5JTD0 557 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ATAT1Q5SQI0 421 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 KLHDC8AQ8IYD2 350 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TCEANCQ8N8B7 351 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ZFP41Q8N8Y5 198 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 HERVK_113Q902F9 699 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 COQ8BQ96D53 544 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ART5Q96L15 291 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 EPYCQ99645 322 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TMCC3Q9ULS5 477 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 NAALAD2Q9Y3Q0 740 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 KIAA0513O60268 411 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 LDB3O75112 727 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SEMA7AO75326 666 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SEMG1P04279 462 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CSNK1G2P78368 415 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TOR1AIP1Q5JTV8 583 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 FAM46CQ5VWP2 391 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 METRNLQ641Q3 311 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 STEAP3Q658P3 488 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 LRRC56Q8IYG6 542 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 METTL4Q8N3J2 472 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 DTX3Q8N9I9 347 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 OR9A2Q8NGT5 310 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 OR5K2Q8NHB8 316 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 WFIKKN2Q8TEU8 576 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TTTY10Q9BZA0 68 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 GABARAPL1Q9H0R8 117 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 BRF2Q9HAW0 419 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 LHX9Q9NQ69 397 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 SNTG1Q9NSN8 517 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ANGPT4Q9Y264 503 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CPSF4LA6NMK7 179 aaKnown RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 QSOX1O00391 747 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 UGDHO60701 494 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CDK1P06493 297 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 FUT1P19526 365 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 KCNC3Q14003 757 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 UBE3DQ7Z6J8 389 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CYP4Z2PQ8N1L4 340 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TMIEQ8NEW7 156 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 OR5T3Q8NGG3 340 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 S100ZQ8WXG8 99 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 STARD8Q92502 1023 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 ZNF566Q969W8 418 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 C11orf24Q96F05 449 aaPredicted RBP12.8□□□□□ -0.36
TTC39B-201ENST00000297615 MGLLQ99685 303 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 TPSD1Q9BZJ3 242 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 CHST8Q9H2A9 424 aa12.8□□□□□ -0.36
TTC39B-201ENST00000297615 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms