RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM186AA6NE01 2351 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 A0A1W2PQ09 198 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 DUX1O43812 170 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 OMPP47874 163 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 DEFA5Q01523 94 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 FGFBP1Q14512 234 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PGBD2Q6P3X8 592 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 ADGRD2Q7Z7M1 963 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 TSPAN33Q86UF1 283 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 NEIL3Q8TAT5 605 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RFKQ969G6 155 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 B3GNT3Q9Y2A9 372 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 KHNYNO15037 678 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 TNFSF8P32971 234 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 CRISP1P54107 249 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 VLDLRP98155 873 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 TOR1AIP1Q5JTV8 583 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RPTNQ6XPR3 784 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 LRRC70Q7Z2Q7 622 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 OR51G2Q8NGK0 314 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 DEDD2Q8WXF8 326 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 LRR1Q96L50 414 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 CENPOQ9BU64 300 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 RBM38Q9H0Z9 239 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 ABCG5Q9H222 651 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 MEIOCA2RUB1 952 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 PLD2O14939 933 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RETP07949 1114 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 CD8BP10966 210 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 MAN2A2P49641 1150 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 LASP1Q14847 261 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 FAM92BQ6ZTR7 304 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 B3GNT7Q8NFL0 401 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 OR4K17Q8NGC6 315 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 OR9A1PQ8NGU1 263 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 RANGRFQ9HD47 186 aaPredicted RBP12.82□□□□□ -0.36
HPS3-201ENST00000296051 C5AR2Q9P296 337 aa12.82□□□□□ -0.36
HPS3-201ENST00000296051 ITGB4P16144 1822 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 FXYD1O00168 92 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 MAGEA12P43365 314 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 CBLBQ13191 982 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 DOC2AQ14183 400 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 ZNF234Q14588 700 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 CTU2Q2VPK5 515 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 FIBINQ8TAL6 211 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 TOE1Q96GM8 510 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 IL17FQ96PD4 163 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 IFT27Q9BW83 186 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 DDX60LQ5H9U9 1706 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 AHCTF1Q8WYP5 2266 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 NUPL2O15504 423 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 IFNGP01579 166 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 HNMTP50135 292 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 CAV3P56539 151 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 LIN54Q6MZP7 749 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 FRRS1Q6ZNA5 592 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 NEURL2Q9BR09 285 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 MRPL15Q9P015 296 aaKnown RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 TNFRSF10DQ9UBN6 386 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 NME7Q9Y5B8 376 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 B3GALT4O96024 378 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 ATF6P18850 670 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 ACSL1P33121 698 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 NUP62P37198 522 aaPredicted RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 CASP3P42574 277 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 EMP3P54852 163 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 AQP6Q13520 282 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 TMEM31Q5JXX7 168 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 LMNTD1Q8N9Z9 388 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 LILRB4Q8NHJ6 448 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 ATOH1Q92858 354 aaPredicted RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
HPS3-201ENST00000296051 SIT1Q9Y3P8 196 aa12.81□□□□□ -0.36
HPS3-201ENST00000296051 J3QLW9 94 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 HEXBP07686 556 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ZNF19P17023 458 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 SDC1P18827 310 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 RGS6P49758 472 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 DAPP51397 102 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 AGAP7PQ5VUJ5 663 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 CPZQ66K79 652 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ZNF367Q7RTV3 350 aa12.8□□□□□ -0.36
HPS3-201ENST00000296051 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms