RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TNFRSF11BO00300 401 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 BCKDKO14874 412 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 ASNA1O43681 348 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 GALR3O60755 368 aaPredicted RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 DNAJB6O75190 326 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 UBXN7O94888 489 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 OR6B1O95007 311 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 IFNW1P05000 195 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 HMGN2P05204 90 aaKnown RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 CDH2P19022 906 aaPredicted RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 BCKDHBP21953 392 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 ELK4P28324 431 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PPP2R1BP30154 601 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 KCNJ5P48544 419 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 MAN2A2P49641 1150 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 HLCSP50747 726 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 ISL1P61371 349 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 SPIBQ01892 262 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 KEAP1Q14145 624 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PUM1Q14671 1186 aaKnown RBP eCLIP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 LASP1Q14847 261 aaKnown RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 LTB4RQ15722 352 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 SYPL1Q16563 259 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 CYP27C1Q4G0S4 372 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PRAMEF8Q5VWM4 474 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PRAMEF7Q5VXH5 474 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 KLHL35Q6PF15 583 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PRSS41Q7RTY9 318 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 SLC44A2Q8IWA5 706 aaPredicted RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 SDR16C5Q8N3Y7 309 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 CHDHQ8NE62 594 aaPredicted RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 RASSF5Q8WWW0 418 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 HDAC2Q92769 488 aaKnown RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 GIMAP5Q96F15 307 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 ZNF607Q96SK3 696 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 PITX2Q99697 317 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 GABARAPL3Q9BY60 117 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 IL21RQ9HBE5 538 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 C3orf14Q9HBI5 128 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 FAM60AQ9NP50 221 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 DDX18Q9NVP1 670 aaKnown RBP9.58□□□□□ -0.88
C9orf43-201ENST00000288462 KIF17Q9P2E2 1029 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 TRPC4Q9UBN4 977 aa9.58□□□□□ -0.88
C9orf43-201ENST00000288462 THADAQ6YHU6 1953 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 ZNF860A6NHJ4 632 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 LMO7DNF2Z398 122 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 AQP9O43315 295 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 HCRTR1O43613 425 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 UGT2B11O75310 529 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 FESP07332 822 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 NR2F1P10589 423 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 RHCEP18577 417 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 TLX1P31314 330 aaPredicted RBP9.57□□□□□ -0.88
C9orf43-201ENST00000288462 RYKP34925 604 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 POLR2IP36954 125 aaKnown RBP9.57□□□□□ -0.88
C9orf43-201ENST00000288462 CLK3P49761 638 aaKnown RBP9.57□□□□□ -0.88
C9orf43-201ENST00000288462 HMGA2P52926 109 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 CRISP3P54108 245 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 CD47Q08722 323 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 CTU2Q2VPK5 515 aaKnown RBP9.57□□□□□ -0.88
C9orf43-201ENST00000288462 RBM48Q5RL73 367 aaKnown RBP9.57□□□□□ -0.88
C9orf43-201ENST00000288462 GALNT5Q7Z7M9 940 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 UBALD2Q8IYN6 164 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 ATG16L2Q8NAA4 619 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 OR4K14Q8NGD5 310 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 GIPC3Q8TF64 312 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 DNASE2BQ8WZ79 361 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 MAGED4Q96JG8 741 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 BTBD2Q9BX70 525 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 YIPF3Q9GZM5 350 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 ING2Q9H160 280 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 MIR1-1HGQ9H1L0 117 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 RIBC2Q9H4K1 309 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 KRT84Q9NSB2 600 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 ACER3Q9NUN7 267 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 SH3GLB1Q9Y371 365 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 DSPPQ9NZW4 1301 aa9.57□□□□□ -0.88
C9orf43-201ENST00000288462 ARRDC5A6NEK1 342 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 J3KTA2 159 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 CYR61O00622 381 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 SERPINB7O75635 380 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 EIF2S1P05198 315 aaKnown RBP9.56□□□□□ -0.88
C9orf43-201ENST00000288462 PROS1P07225 676 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 CHRM4P08173 479 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 IFI6P09912 130 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 ETS2P15036 469 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 IL7RP16871 459 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 CDH3P22223 829 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 CDH12P55289 794 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 TPD52P55327 224 aaPredicted RBP9.56□□□□□ -0.88
C9orf43-201ENST00000288462 VSX2P58304 361 aaPredicted RBP9.56□□□□□ -0.88
C9orf43-201ENST00000288462 HNRNPKP61978 463 aaKnown RBP eCLIP9.56□□□□□ -0.88
C9orf43-201ENST00000288462 OLR1P78380 273 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 SIM1P81133 766 aaPredicted RBP9.56□□□□□ -0.88
C9orf43-201ENST00000288462 RAPSNQ13702 412 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 GNA13Q14344 377 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 EXOC3L2Q2M3D2 409 aa9.56□□□□□ -0.88
C9orf43-201ENST00000288462 PRTGQ2VWP7 1150 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms