RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 PCDHB16Q9NRJ7 776 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DCAF13Q9NV06 445 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 LYARQ9NX58 379 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 P2RX2Q9UBL9 471 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PHF11Q9UIL8 331 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 U3KQV3 271 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NUMA1Q14980 2115 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TEX13CA0A0J9YWL9 993 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 SERTM1A2A2V5 107 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DUXAA6NLW8 204 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PTGES3LE9PB15 166 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 APBB3O95704 486 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ZNF8P17098 575 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 CSNK2A2P19784 350 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 P2RY2P41231 377 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MAGEA8P43361 318 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ITGA1P56199 1179 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TRA2BP62995 288 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 ZBED5Q49AG3 693 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ASTLQ6HA08 431 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 NIPAL1Q6NVV3 410 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TICAM1Q8IUC6 712 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 LNX2Q8N448 690 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 OR7A2PQ8NGA2 310 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DPF1Q92782 380 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 ABTB1Q969K4 478 aaPredicted RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CLN6Q9NWW5 311 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 UBAP1Q9NZ09 502 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 HSPE1-MOB4S4R3N1 261 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 GREB1Q4ZG55 1949 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 OR5K4A6NMS3 321 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 A8MUA0 341 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 FADS2P1A8MWK0 482 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 FTCDNL1E5RQL4 147 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DLL1O00548 723 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NDUFV2P19404 249 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CCNA2P20248 432 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 IL32P24001 234 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 AQP1P29972 269 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MPIP34949 423 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 NUDT1P36639 197 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 IL12RB1P42701 662 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 CRISP3P54108 245 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PFN3P60673 137 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 OLR1P78380 273 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 KCNC4Q03721 635 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 GFOD2Q3B7J2 385 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 GALNT15Q8N3T1 639 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CAMKVQ8NCB2 501 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 DENND6BQ8NEG7 585 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 OR52N2Q8NGI0 321 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 FCGR1BQ92637 280 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 HDAC2Q92769 488 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 EID2BQ96D98 161 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 HSH2DQ96JZ2 352 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 CAMK1GQ96NX5 476 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 TMEM184CQ9NVA4 438 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 MRPL39Q9NYK5 338 aaKnown RBP6.6□□□□□ -1.35
VPS8-201ENST00000287546 ZNF229Q9UJW7 825 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 PIAS3Q9Y6X2 628 aa6.6□□□□□ -1.35
VPS8-201ENST00000287546 hCG_1809904A0A1W2PP81 198 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 A0A1W2PPE2 198 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 A0A1W2PR64 198 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 A0A1W2PRV1 198 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 IL1RNP18510 177 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 AHCYP23526 432 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 PSMB9P28065 219 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 TEAD1P28347 426 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 MVKQ03426 396 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 COX10Q12887 443 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 TUBA3CQ13748 450 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 LRIF1Q5T3J3 769 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 REEP3Q6NUK4 255 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 KIAA1211LQ6NV74 962 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 ANKRD54Q6NXT1 300 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 SLCO4C1Q6ZQN7 724 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 METTL25Q8N6Q8 603 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 ZNF540Q8NDQ6 660 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 OR56A1Q8NGH5 318 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 TIMD4Q96H15 378 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 CPPED1Q9BRF8 314 aaPredicted RBP6.59□□□□□ -1.35
VPS8-201ENST00000287546 FNDC11Q9BVV2 318 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 PISDQ9UG56 409 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 KCNK6Q9Y257 313 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 POFUT2Q9Y2G5 429 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 IRGMA1A4Y4 181 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 SMCO3A2RU48 225 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 hCG_2039718K7EN88 272 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 FXYD1O00168 92 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 GAPDHSO14556 408 aaPredicted RBP6.59□□□□□ -1.35
VPS8-201ENST00000287546 AREL1O15033 823 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 SCAMP1O15126 338 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 B4GAT1O43505 415 aa6.59□□□□□ -1.35
VPS8-201ENST00000287546 TRIM3O75382 744 aaPredicted RBP6.59□□□□□ -1.35
VPS8-201ENST00000287546 UGT2B17O75795 530 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms