RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SMIM30A4D0T7 59 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 RNF212BA8MTL3 300 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ACOT7O00154 380 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SERPINE2P07093 398 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PEA15Q15121 130 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 ZDHHC1Q8WTX9 485 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 SORCS1Q8WY21 1168 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 C2orf42Q9NWW7 574 aa8.38□□□□□ -1.07
NIPBL-201ENST00000282516 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SULT1B1O43704 296 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 TAS2R30P59541 319 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 MC2RQ01718 297 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GINS1Q14691 196 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 HGSNATQ68CP4 663 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 TMIGD1Q6UXZ0 262 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 KLK6Q92876 244 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 FKBP10Q96AY3 582 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ABCG5Q9H222 651 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 LOC102723532A0A0G2JNH3 316 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 UGCGQ16739 394 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 COQ5Q5HYK3 327 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 EPGNQ6UW88 154 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ZNF695Q8IW36 515 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 MITD1Q8WV92 249 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 BIRC8Q96P09 236 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SPEF2Q9C093 1822 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 NUP205Q92621 2012 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PAQR3Q6TCH7 311 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GDPD4Q6W3E5 623 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CCDC71Q8IV32 467 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CMIPQ8IY22 773 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 RSC1A1Q92681 617 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 MAL2Q969L2 176 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 FAM83CQ9BQN1 747 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 TFP02787 698 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 C8AP07357 584 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PYCR1P32322 319 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 MLLT10P55197 1068 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 MEP1AQ16819 746 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GOLGA7Q7Z5G4 137 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GLIS3Q8NEA6 775 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CDH20Q9HBT6 801 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ASB4Q9Y574 426 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PRAMEF2O60811 474 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GAAP10253 952 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 AOC1P19801 751 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 KITLGP21583 273 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CX3CR1P49238 355 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 EMX2Q04743 252 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SF3B4Q15427 424 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■■□□ 18.7
NIPBL-201ENST00000282516 PIGWQ7Z7B1 504 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 Q8N9G6 341 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 NDRG1Q92597 394 aaKnown RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 GMEB2Q9UKD1 530 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 STXBP5LQ9Y2K9 1186 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 LSM5Q9Y4Y9 91 aaKnown RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 RHCEP18577 417 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PTH2RP49190 550 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 TLE1Q04724 770 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 HMGN3Q15651 99 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 C2orf27AQ580R0 203 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SGPP2Q8IWX5 399 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 OR2AP1Q8NGE2 309 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SFXN5Q8TD22 340 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 DDIT4LQ96D03 193 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 OR51E2Q9H255 320 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 A0A1W2PS29 197 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 VSTM2BA6NLU5 285 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 F5H5P2 479 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ALPIP09923 528 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 RPL23AP62750 156 aaKnown RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 DEFA6Q01524 100 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 ANKRD13BQ86YJ7 626 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SLC43A2Q8N370 569 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 OR8J3Q8NGG0 315 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 BSCL2Q96G97 398 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 RPL10LQ96L21 214 aaKnown RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SLC22A14Q9Y267 594 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 SCAMP1O15126 338 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 TBX10O75333 385 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 UGT2B7P16662 529 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CKMT2P17540 419 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 PBX2P40425 430 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 NPBWR1P48145 328 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 HSD17B7P56937 341 aa8.37□□□□□ -1.07
NIPBL-201ENST00000282516 CSNK2A1P68400 391 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-201ENST00000282516 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms