RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SLC16A6O15403 523 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 LDB3O75112 727 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 JRKO75564 520 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 RECKO95980 971 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 HOXC4P09017 264 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 NR2F6P10588 404 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 JUNDP17535 347 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 NUDT6P53370 316 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 MAZP56270 477 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 HHEXQ03014 270 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 LEXMQ3ZCV2 418 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 SLC48A1Q6P1K1 146 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 COMTD1Q86VU5 262 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 MEX3DQ86XN8 651 aaKnown RBP16.92■□□□□ 0.3
CAPN1-201ENST00000279247 SPARTQ8N0X7 666 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 KLHDC7BQ96G42 594 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 OR2A5Q96R48 311 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 PIP5K1AQ99755 562 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 LHPPQ9H008 270 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 IL21RQ9HBE5 538 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 PTTG2Q9NZH5 202 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 P2RX2Q9UBL9 471 aa16.92■□□□□ 0.3
CAPN1-201ENST00000279247 HOXB6P17509 224 aaKnown RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 DDX5P17844 614 aaKnown RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 PTNP21246 168 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 MAP2K4P45985 399 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 VSX2P58304 361 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 DGCR6Q14129 220 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 MRM1Q6IN84 353 aaKnown RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ABI3BPQ7Z7G0 1075 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF540Q8NDQ6 660 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 OR4D11Q8NGI4 311 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 FLVCR1-AS1Q8TAF5 88 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 GSDMCQ9BYG8 508 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ACER3Q9NUN7 267 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 WSB2Q9NYS7 404 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 PCOLCE2Q9UKZ9 415 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 WBP11Q9Y2W2 641 aaKnown RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 TRBV4-1A0A0J9YWV2 114 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SPTY2D1-AS1A0A0U1RR47 76 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 H0YGG7 62 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 GUCY1B2O75343 617 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 MFN2O95140 757 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ITGA2P17301 1181 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 CD6P30203 668 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ARF3P61204 181 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 LSAMPQ13449 338 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 PIN1Q13526 163 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 KIR2DS3Q14952 304 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 RBM48Q5RL73 367 aaKnown RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 AQP11Q8NBQ7 271 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 RERGQ96A58 199 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ZG16BQ96DA0 208 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ALPK1Q96QP1 1244 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 APOL4Q9BPW4 351 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 GABARAPL1Q9H0R8 117 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SEMA3GQ9NS98 782 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 BLOC1S6Q9UL45 172 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 CLCA2Q9UQC9 943 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 GMEB1Q9Y692 573 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ENPP4Q9Y6X5 453 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ABCB7O75027 752 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SDC3O75056 442 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 FAM20BO75063 409 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SOX14O95416 240 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SRFP11831 508 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 PPP2R1BP30154 601 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 MPIP34949 423 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 FRKP42685 505 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-201ENST00000279247 TGM3Q08188 693 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 AHSA2Q719I0 299 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SETD9Q8NE22 299 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 NCSTNQ92542 709 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SLC9A6Q92581 669 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 RNF31Q96EP0 1072 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 NODALQ96S42 347 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF347Q96SE7 839 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 SLC6A14Q9UN76 642 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 PCDHGA2Q9Y5H1 932 aa16.91■□□□□ 0.3
CAPN1-201ENST00000279247 OR2A25A4D2G3 310 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 KRBA1A5PL33 1030 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 FFAR1O14842 300 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 PCDHGA12O60330 932 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 SEMA7AO75326 666 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 INMTO95050 263 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 ITGAMP11215 1152 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 XKP51811 444 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 TRA2BP62995 288 aaKnown RBP16.9■□□□□ 0.3
CAPN1-201ENST00000279247 RUNX2Q13950 521 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 FAHD1Q6P587 224 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 CCDC80Q76M96 950 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 NUP43Q8NFH3 380 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 GAL3ST3Q96A11 431 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 CCDC3Q9BQI4 270 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 ZNF556Q9HAH1 456 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 DOLKQ9UPQ8 538 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 HS3ST3A1Q9Y663 406 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 AGRPO00253 132 aa16.9■□□□□ 0.3
CAPN1-201ENST00000279247 CHRM4P08173 479 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms