RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MAGEA6P43360 314 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 CAMLGP49069 296 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GBX1Q14549 363 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 LRRC73Q5JTD7 316 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SLC2A4RGQ9NR83 387 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ALKBH4Q9NXW9 302 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FBXL3Q9UKT7 428 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 NUBP2Q9Y5Y2 271 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FNTBP49356 437 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 UGT8Q16880 541 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 DEFB115Q30KQ5 88 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GPRC6AQ5T6X5 926 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SPRYD7Q5W111 196 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 LRRC25Q8N386 305 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR51D1Q8NGF3 324 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 EIF5A2Q9GZV4 153 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 DZANK1Q9NVP4 752 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 KCNIP1Q9NZI2 227 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 KLHL13Q9P2N7 655 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SNAP29O95721 258 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PTPRRQ15256 657 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PTCHD3Q3KNS1 767 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 XKR5Q6UX68 686 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ASPGQ86U10 573 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ELMOD2Q8IZ81 293 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR51G2Q8NGK0 314 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR5H2Q8NGV7 314 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF516Q92618 1163 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM74Q96NL1 305 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 IKZF4Q9H2S9 585 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FAM118AQ9NWS6 357 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR2B3O76000 313 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PAHP00439 452 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 BMP2P12643 396 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FDXRP22570 491 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 RIDAP52758 137 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 C6orf136Q5SQH8 315 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 EGFL6Q8IUX8 553 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 OR9I1Q8NGQ6 314 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 STRADBQ9C0K7 418 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF226Q9NYT6 803 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 NDUFAF4Q9P032 175 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 HEXBP07686 556 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 ATXN7L3Q14CW9 347 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 METTL2BQ6P1Q9 378 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 DPY19L3Q6ZPD9 716 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TSPYL5Q86VY4 417 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 MMAAQ8IVH4 418 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TCTEX1D2Q8WW35 142 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FZD1Q9UP38 647 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 COL1A1P02452 1464 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GPR89AB7ZAQ6 455 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GPR89BP0CG08 455 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SSX2Q16385 188 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM173Q86WV6 379 aaPredicted RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PQLC3Q8N755 202 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SCRN2Q96FV2 425 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 P2RY13Q9BPV8 354 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SLC2A6Q9UGQ3 507 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 TRBV2A0A0J9YWF9 115 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PLATP00750 562 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 JUPP14923 745 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PRKCAP17252 672 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 MELKQ14680 651 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 LNX2Q8N448 690 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 GALNT11Q8NCW6 608 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 CNOT9Q92600 299 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 SGTBQ96EQ0 304 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 FBXL12Q9NXK8 326 aa7.64□□□□□ -1.19
LIMD1-201ENST00000273317 PRRC2BQ5JSZ5 2229 aaKnown RBP7.64□□□□□ -1.19
LIMD1-201ENST00000273317 C17orf113A0A1B0GUU1 675 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 SULT1C2O00338 296 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 RETP07949 1114 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 RPL17P18621 184 aaKnown RBP7.63□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF280AP59817 542 aaPredicted RBP7.63□□□□□ -1.19
LIMD1-201ENST00000273317 CCDC58Q4VC31 144 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 METTL11BQ5VVY1 283 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 STRA6Q9BX79 667 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 TSPAN6O43657 245 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 RSU1Q15404 277 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 TMPRSS12Q86WS5 348 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 DNAJC22Q8N4W6 341 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 OR10T2Q8NGX3 314 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 SETD7Q8WTS6 366 aaKnown RBP7.63□□□□□ -1.19
LIMD1-201ENST00000273317 TRIB2Q92519 343 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 OR2M4Q96R27 311 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 NPY6RQ99463 290 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 AIG1Q9NVV5 245 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 CLEC4EQ9ULY5 219 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 OR5K4A6NMS3 321 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 UGDHO60701 494 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 JRKO75564 520 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 NDUFV2P19404 249 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 TDGQ13569 410 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 DTX3Q8N9I9 347 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 BEST4Q8NFU0 473 aa7.63□□□□□ -1.19
LIMD1-201ENST00000273317 OR6N2Q8NGY6 317 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms