RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 CCDC54Q8NEL0 328 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 OR56A3Q8NH54 315 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 MAL2Q969L2 176 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 KLHDC7BQ96G42 594 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 P2RY13Q9BPV8 354 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 TTTY10Q9BZA0 68 aa10.27□□□□□ -0.77
CD44-201ENST00000263398 MAP1BP46821 2468 aaKnown RBP10.27□□□□□ -0.77
CD44-201ENST00000263398 A0A1W2PP55 124 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GXYLT2A0PJZ3 443 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ZSCAN5BA6NJL1 495 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 DISC1C4P0D8 188 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 E7EQ34 232 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TPD52L2O43399 206 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 GPR37L1O60883 481 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BCAS1O75363 584 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 ITGA5P08648 1049 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SRCP12931 536 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 OSMP13725 252 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GM2AP17900 193 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CD97P48960 835 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BTBD16Q32M84 506 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 MLIPQ5VWP3 458 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GDPGP1Q6ZNW5 385 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SPATC1Q76KD6 591 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GKN2Q86XP6 184 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 PAPD5Q8NDF8 572 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 OR2L8Q8NGY9 312 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 C17orf50Q8WW18 174 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SORCS1Q8WY21 1168 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 RAD9AQ99638 391 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CMKLR1Q99788 373 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 RDH14Q9HBH5 336 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CPNE5Q9HCH3 593 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 DCAF13Q9NV06 445 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 FAIMQ9NVQ4 179 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GPR45Q9Y5Y3 372 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 MYH1P12882 1939 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BTAF1O14981 1849 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CPED1A4D0V7 1026 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 H3BMQ9 156 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 PORP16435 677 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 CD40LGP29965 261 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ARRB1P49407 418 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 RAB28P51157 221 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GPR143P51810 404 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TAS2R38P59533 333 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SELENOWP63302 87 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SNTB2Q13425 540 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 GRM2Q14416 872 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SLC25A25Q6KCM7 469 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 KLBQ86Z14 1044 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 DCP2Q8IU60 420 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 NAGSQ8N159 534 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM151AQ8N4L1 468 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CPNE2Q96FN4 548 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM41AQ96HV5 264 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 COG8Q96MW5 612 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 NELL2Q99435 816 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM246Q9BRR3 403 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 KCNK12Q9HB15 430 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 CSNK1G1Q9HCP0 422 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 LOC285095A0A1B0GVY8 99 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 DRGXA6NNA5 263 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 EEF1E1O43324 174 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 JRKO75564 520 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 PTTG1O95997 202 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ENDOUP21128 410 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 PRDX3P30048 256 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 OXTRP30559 389 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 VSX2P58304 361 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 POU4F2Q12837 409 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 DHCR24Q15392 516 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 AAK1Q2M2I8 961 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM107Q6UX40 140 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM156Q8N614 296 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GATAD2BQ8WXI9 593 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 TMEM234Q8WY98 164 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 MMABQ96EY8 250 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 INPP5KQ9BT40 448 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 ERVK13-1Q9NX77 482 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 BTNL2Q9UIR0 455 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 MAGED1Q9Y5V3 778 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GLI3P10071 1580 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 A0A0G2JPF8 293 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 A0A1W2PQU0 124 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 HNRNPCL3B7ZW38 293 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 LRRTM2O43300 516 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 HCKP08631 526 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 HNRNPCL4P0DMR1 293 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 SYN1P17600 705 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GNG2P59768 71 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 RPS15AP62244 130 aaKnown RBP10.26□□□□□ -0.77
CD44-201ENST00000263398 VAMP2P63027 116 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 KEAP1Q14145 624 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GAS6Q14393 721 aa10.26□□□□□ -0.77
CD44-201ENST00000263398 GRK1Q15835 563 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms