RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 NMT2O60551 498 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 SNAP91O60641 907 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF254O75437 659 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 RPLP0P05388 317 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 S100A6P06703 90 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ASGR1P07306 291 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TRIM49P0CI25 452 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TRIM49CP0CI26 452 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 CCDC192P0DO97 292 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TNFSF10P50591 281 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ABCE1P61221 599 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TRA2BP62995 288 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 C3AR1Q16581 482 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 UPP1Q16831 310 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 C2CD6Q53TS8 623 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ZCCHC12Q6PEW1 402 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 MFSD7Q6UXD7 560 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 RFPL4BQ6ZWI9 263 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 CDH26Q8IXH8 852 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ELMOD2Q8IZ81 293 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 FAM133AQ8N9E0 248 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 Q8NBF4 154 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 SIDT2Q8NBJ9 832 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 OR52M1Q8NGK5 317 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 CCDC26Q8TAB7 109 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 MIPOL1Q8TD10 442 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ATP8B4Q8TF62 1192 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 LRRC15Q8TF66 581 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF689Q96CS4 500 aaPredicted RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 NRBF2Q96F24 287 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 GUCD1Q96NT3 240 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 PKP2Q99959 881 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 DDX50Q9BQ39 737 aaKnown RBP3.68□□□□□ -1.82
CCDC54-201ENST00000261058 NFKBIZQ9BYH8 718 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF665Q9H7R5 613 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 GDAP2Q9NXN4 497 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 UBAP1Q9NZ09 502 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 NLGN3Q9NZ94 848 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 TMOD2Q9NZR1 351 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 CCPG1Q9ULG6 757 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 PLCL2Q9UPR0 1127 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 PRSS21Q9Y6M0 314 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 EVC2Q86UK5 1308 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 NINLQ9Y2I6 1382 aa3.68□□□□□ -1.82
CCDC54-201ENST00000261058 IGHV3OR16-10A0A075B7F0 116 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 IQCMA0A1B0GVH7 501 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 XKRY2A2RUG3 117 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 SLC15A5A6NIM6 579 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 DYNC1I1O14576 645 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CCSO14618 274 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CHUKO15111 745 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 RNF113AO15541 343 aaKnown RBP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 STBD1O95210 358 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 KRT6BP04259 564 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ETS1P14921 441 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 AHCYP23526 432 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 EPS15P42566 896 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 KRT6CP48668 564 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CRYBA2P53672 197 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 RIGQ13278 110 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 RCN1Q15293 331 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 SPHARQ15513 63 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 KRT71Q3SY84 523 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CARM1Q86X55 608 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CACUL1Q86Y37 369 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 UNC5CLQ8IV45 518 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 OR4N5Q8IXE1 308 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 SLC7A5P1Q8MH63 180 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ELMOD1Q8N336 334 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 METTL4Q8N3J2 472 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ARL14Q8N4G2 192 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 LINC00469Q8N7U9 141 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 CLEC1AQ8NC01 280 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 FAM46BQ96A09 425 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ULK4Q96C45 1275 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 C14orf79Q96F83 325 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 S1PR3Q99500 378 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 RBM4BQ9BQ04 359 aaKnown RBP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ERP44Q9BS26 406 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 MTIF3Q9H2K0 278 aaKnown RBP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 IL1RAPQ9NPH3 570 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF319Q9P2F9 582 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ERVK-19Q9WJR5 959 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 KCNK6Q9Y257 313 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 TDRKHQ9Y2W6 561 aaKnown RBP3.67□□□□□ -1.82
CCDC54-201ENST00000261058 ZHX2Q9Y6X8 837 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 GAKO14976 1311 aa3.67□□□□□ -1.82
CCDC54-201ENST00000261058 TRBV2A0A0J9YWF9 115 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 TCP10L2B9ZVM9 353 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 GOLGA6L19H0YKK7 550 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CLDN3O15551 220 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 NUDT21O43809 227 aaKnown RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 GMFGO60234 142 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CPNE6O95741 557 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 CGAP01215 116 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 EPOP01588 193 aa3.66□□□□□ -1.82
CCDC54-201ENST00000261058 SBK2P0C263 348 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms