RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 LILRA2Q8N149 483 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR14C36Q8NHC7 312 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC5A11Q8WWX8 675 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 TMEM125Q96AQ2 219 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 TAPBPLQ9BX59 468 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 QRSL1Q9H0R6 528 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GPN2Q9H9Y4 310 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
CTDSPL2-201ENST00000260327 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 A0A0A6YYH2 397 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 A0A1W2PRU2 124 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 A6NJ64 397 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 FAAHO00519 579 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRICKLE3O43900 615 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 EOMESO95936 686 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ITGA5P08648 1049 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CD34P28906 385 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 RBMXP38159 391 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 HTR6P50406 440 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 RASGEF1BQ0VAM2 473 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 GALNT13Q8IUC8 556 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRSS58Q8IYP2 241 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 SLC44A3Q8N4M1 653 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR5T2Q8NGG2 359 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.32□□□□□ -0.929e-7■■■□□ 15.5
CTDSPL2-201ENST00000260327 LCN9Q8WX39 176 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 NSMAFQ92636 917 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 DNAJA3Q96EY1 480 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 EFCAB11Q9BUY7 163 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MRPS30Q9NP92 439 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 FNIP2Q9P278 1114 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PCDHB14Q9Y5E9 798 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 DUXAA6NLW8 204 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAS1P04201 325 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 HCKP08631 526 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ARSAP15289 507 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 TRAM2Q15035 370 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 AMZ2Q86W34 360 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CLECL1Q8IZS7 167 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CADM3Q8N126 398 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 WDR20Q8TBZ3 569 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ST8SIA2Q92186 375 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MCHR1Q99705 422 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 UQCC2Q9BRT2 126 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 WDR45Q9Y484 360 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 BORCS7-ASMTA0A0B4J1R7 106 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 GRXCR2A6NFK2 248 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PRKYO43930 277 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MAPK3P27361 379 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ALKAL2Q6UX46 152 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF280BQ86YH2 543 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 RGMAQ96B86 450 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MED30Q96HR3 178 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 TREX2Q9BQ50 279 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 SYNPO2LQ9H987 977 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 TUBG2Q9NRH3 451 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ACSL5Q9ULC5 683 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PHRF1Q9P1Y6 1649 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CHD4Q14839 1912 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ANKRD33BA6NCL7 494 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 F5H5P2 479 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ARPC1BO15143 372 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 B3GALT2O43825 422 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 GMDSO60547 372 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 IFNA17P01571 189 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 MT-ND4P03905 459 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 IQCF3P0C7M6 154 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 FOSL1P15407 271 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CXCR1P25024 350 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PITPNBP48739 271 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CCR8P51685 355 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 GAS6Q14393 721 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 NFATC4Q14934 902 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 STK11Q15831 433 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 FAM205BPQ63HN1 556 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PNLDC1Q8NA58 520 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CCDC54Q8NEL0 328 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PAAF1Q9BRP4 392 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 INPP5KQ9BT40 448 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 NLGN3Q9NZ94 848 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 ZNF705GA8MUZ8 300 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PPP6CO00743 305 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 PET100P0DJ07 73 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CBSLP0DN79 551 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 HOXD8P13378 290 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 IL4RP24394 825 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 S100PP25815 95 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 HSD11B1P28845 292 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CBSP35520 551 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 CAMLGP49069 296 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 TCEAL6Q6IPX3 200 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 B3GNT7Q8NFL0 401 aa9.32□□□□□ -0.92
CTDSPL2-201ENST00000260327 OR2AP1Q8NGE2 309 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms