RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 MT-ND5P03915 603 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 EBLN1P0CF75 366 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 GABRB3P28472 473 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 MAPK9P45984 424 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CRISP3P54108 245 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 FOXA1P55317 472 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 NBPF12Q5TAG4 269 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 RPL13AP3Q6NVV1 102 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 RHEBL1Q8TAI7 183 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 GGHQ92820 318 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SLC32A1Q9H598 525 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OR2S2Q9NQN1 319 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 POT1Q9NUX5 634 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LIPT1Q9Y234 373 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 NRCAMQ92823 1304 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 TBL1XO60907 577 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ARSAP15289 507 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CBR1P16152 277 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PFKLP17858 780 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ACVR2AP27037 513 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PITPNBP48739 271 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ADARB1P78563 741 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 TLE3Q04726 772 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 FAM171A1Q5VUB5 890 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PLAG1Q6DJT9 500 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LYPD8Q6UX82 237 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 FAM122BQ7Z309 247 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 MON1AQ86VX9 555 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 RGL4Q8IZJ4 473 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 GTPBP8Q8N3Z3 284 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LINC00471Q8N535 108 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 BEND7Q8N7W2 519 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OR51D1Q8NGF3 324 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CNOT9Q92600 299 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 INTS12Q96CB8 462 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LRR1Q96L50 414 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OPALINQ96PE5 141 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 POPDC3Q9HBV1 291 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 GALNT9Q9HCQ5 603 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ERVW-1Q9UQF0 538 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SNED1Q8TER0 1413 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 HAS3O00219 553 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SDC3O75056 442 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 RGS9O75916 674 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SLC34A2O95436 690 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 EPOP01588 193 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 C8GP07360 202 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ARSBP15848 533 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 MAPK3P27361 379 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 YBEYP58557 167 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PCBP1Q15365 356 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OR4D1Q15615 310 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 HFE2Q6ZVN8 426 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 WDR53Q7Z5U6 358 aaPredicted RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 KLBQ86Z14 1044 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CMTM7Q96FZ5 175 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 C3orf30Q96M34 536 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 CAMK1GQ96NX5 476 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 NELFAQ9H3P2 528 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SLC28A3Q9HAS3 691 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 DCAF13Q9NV06 445 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SAGE1Q9NXZ1 904 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 IFNA5P01569 189 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 TGM4P49221 684 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PNLDC1Q8NA58 520 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OR7D4Q8NG98 312 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 STK35Q8TDR2 534 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 MRPS31Q92665 395 aaKnown RBP9.8□□□□□ -0.84
TRPM1-201ENST00000256552 ARL11Q969Q4 196 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 PCED1BQ96HM7 432 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 OR2M2Q96R28 347 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 USP22Q9UPT9 525 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SH2B3Q9UQQ2 575 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 SPATA31A1Q5TZJ5 1347 aa9.8□□□□□ -0.84
TRPM1-201ENST00000256552 LOC285095A0A1B0GVY8 99 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 TREHO43280 583 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 C22orf31O95567 290 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 LATS1O95835 1130 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 BCKDHAP12694 445 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 GGT2P36268 569 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 OR12D2P58182 307 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 CEACAM20Q6UY09 585 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 ZER1Q7Z7L7 766 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 ENTHD1Q8IYW4 607 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 ZFP82Q8N141 532 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 OR6K6Q8NGW6 343 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 RADILQ96JH8 1075 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 TMEM68Q96MH6 324 aa9.79□□□□□ -0.84
TRPM1-201ENST00000256552 NECAB3Q96P71 396 aaPredicted RBP9.79□□□□□ -0.84
TRPM1-201ENST00000256552 MYEF2Q9P2K5 600 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms