RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 TADA1Q96BN2 335 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 CPNE2Q96FN4 548 aaPredicted RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 DCLRE1CQ96SD1 692 aaKnown RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 DOHHQ9BU89 302 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 SIRT5Q9NXA8 310 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 CXXC1Q9P0U4 656 aaPredicted RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 KPNA3O00505 521 aaPredicted RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 WNT9AO14904 365 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 CACNG3O60359 315 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 PEPDP12955 493 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF140P52738 457 aaPredicted RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 HSPB3Q12988 150 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 IRF3Q14653 427 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 AANATQ16613 207 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 TRMT61AQ96FX7 289 aaKnown RBP12.68□□□□□ -0.38
CCDC117-201ENST00000249064 APIPQ96GX9 242 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 ZSWIM3Q96MP5 696 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 PHF11Q9UIL8 331 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 Q9Y3F1 56 aa12.68□□□□□ -0.38
CCDC117-201ENST00000249064 STX16O14662 325 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TO15178 435 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 NUDT1P36639 197 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 RFX2P48378 723 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 CCR6P51684 374 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 CDK6Q00534 326 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF33BQ06732 778 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 C3P1Q6ZMU1 363 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TRMT11Q7Z4G4 463 aaKnown RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TMEM159Q96B96 161 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 MAGIXQ9H6Y5 334 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 ZMAT5Q9UDW3 170 aaKnown RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 FBXO10Q9UK96 956 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 ANK1P16157 1881 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 PSME4Q14997 1843 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 A0A0G2JMP0 313 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 MT-ND4P03905 459 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 GALTP07902 379 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SRPRAP08240 638 aaKnown RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 CCDC190Q86UF4 302 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SCPEP1Q9HB40 452 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 KLHL21Q9UJP4 597 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 PCDHB1Q9Y5F3 818 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TNS1Q9HBL0 1735 aaKnown RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF840PA6NDX5 716 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TXNL1O43396 289 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TFP02787 698 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 PRPS1L1P21108 318 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 ACADLP28330 430 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 HOXC13P31276 330 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 HNF1BP35680 557 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SPAM1P38567 509 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 PSPHP78330 225 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SP3Q02447 781 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TMPRSS11BQ86T26 416 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 SPAG16Q8N0X2 631 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 TMEM145Q8NBT3 493 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 EQTNQ9NQ60 294 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 RNF186Q9NXI6 227 aa12.67□□□□□ -0.38
CCDC117-201ENST00000249064 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
CCDC117-201ENST00000249064 LOC100509620A0A075B734 347 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 E2F3O00716 465 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 ERAL1O75616 437 aaKnown RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 BCHEP06276 602 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 MANFP55145 182 aaKnown RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 CCDC157Q569K6 752 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 CAPN13Q6MZZ7 669 aaPredicted RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 NOXRED1Q6NXP6 359 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 CD300LGQ6UXG3 332 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF730Q6ZMV8 503 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 PRSS42Q7Z5A4 293 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 CCDC115Q96NT0 180 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 C1QTNF7Q9BXJ2 289 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 SRRQ9GZT4 340 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 PIGUQ9H490 435 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 BRD9Q9H8M2 597 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 ACTR10Q9NZ32 417 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF225Q9UK10 706 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 A0A0G2JN53 185 aa12.66□□□□□ -0.38
CCDC117-201ENST00000249064 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
CCDC117-201ENST00000249064 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms