RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF267Q14586 743 aaPredicted RBP11.83□□□□□ -0.52
VPREB3-201ENST00000248948 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 SPDYAQ5MJ70 313 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 RTL4Q6ZR62 310 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
VPREB3-201ENST00000248948 SLC15A4Q8N697 577 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 PSD4Q8NDX1 1056 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 OR7G1Q8NGA0 311 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 UCN3Q969E3 161 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 EBPLQ9BY08 206 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 STMN4Q9H169 189 aaPredicted RBP11.83□□□□□ -0.52
VPREB3-201ENST00000248948 MYNNQ9NPC7 610 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 UTS2RQ9UKP6 389 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 ERVK-11Q9UQG0 969 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 ENTPD4Q9Y227 616 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 DLGAP4Q9Y2H0 992 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 CCL27Q9Y4X3 112 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF780BQ9Y6R6 833 aa11.83□□□□□ -0.52
VPREB3-201ENST00000248948 USP9YO00507 2555 aaPredicted RBP11.83□□□□□ -0.52
VPREB3-201ENST00000248948 FLNBO75369 2602 aaKnown RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 WASHC1A8K0Z3 465 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 KLRC4-KLRK1H3BQV0 150 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CTIFO43310 598 aaKnown RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ERAL1O75616 437 aaKnown RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SNUPNO95149 360 aaKnown RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ZWINTO95229 277 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CHRNGP07510 517 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 FGF4P08620 206 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ANXA4P09525 319 aaPredicted RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CREB1P16220 341 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 DDCP20711 480 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CEBPEQ15744 281 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 PRICKLE4Q2TBC4 344 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ARL13AQ5H913 290 aaPredicted RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SCIMPQ6UWF3 145 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 C16orf47Q6ZP98 133 aaPredicted RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 EXOC3L1Q86VI1 746 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 MMP21Q8N119 569 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 OR6Y1Q8NGX8 325 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF675Q8TD23 568 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 C16orf78Q8WTQ4 265 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ERP27Q96DN0 273 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CNRIP1Q96F85 164 aaPredicted RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF764Q96H86 408 aaPredicted RBP11.82□□□□□ -0.52
VPREB3-201ENST00000248948 FCRL1Q96LA6 429 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF681Q96N22 645 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CCT7Q99832 543 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 MAT2BQ9NZL9 334 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 HEY2Q9UBP5 337 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 CFL2Q9Y281 166 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 TMED5Q9Y3A6 229 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 DNAJC15Q9Y5T4 150 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 HECTD1Q9ULT8 2610 aa11.82□□□□□ -0.52
VPREB3-201ENST00000248948 SETXQ7Z333 2677 aaKnown RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 BIRC5O15392 142 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SLITRK5O94991 958 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 AGFG2O95081 481 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 NADKO95544 446 aaPredicted RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 CT62P0C5K7 136 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 MST1P26927 711 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SERPINB3P29508 390 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SSTR4P31391 388 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SERPINB4P48594 390 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 TMED10P49755 219 aaKnown RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 MEOX1P50221 254 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ST13P50502 369 aaKnown RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 BTKQ06187 659 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 RBPJQ06330 500 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 MAP4K2Q12851 820 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 PIGGQ5H8A4 983 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SH2D4BQ5SQS7 431 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 NOXRED1Q6NXP6 359 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 BNC2Q6ZN30 1099 aaPredicted RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ZCCHC23Q6ZST2 131 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 MDGA2Q7Z553 956 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SIAH3Q8IW03 269 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 KIRREL3Q8IZU9 778 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 CLYBLQ8N0X4 340 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 TAGAPQ8N103 731 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 CPSF7Q8N684 471 aaKnown RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ZNF615Q8N8J6 731 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 PRR7Q8TB68 274 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPREB3-201ENST00000248948 TWIST2Q8WVJ9 160 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 CTHRC1Q96CG8 243 aa11.81□□□□□ -0.52
VPREB3-201ENST00000248948 SPACA9Q96E40 222 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms