RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ST13P50502 369 aaKnown RBP14.92□□□□□ -0.02
LRFN1-201ENST00000248668 PCBP4P57723 403 aaKnown RBP14.92□□□□□ -0.02
LRFN1-201ENST00000248668 LASP1Q14847 261 aaKnown RBP14.92□□□□□ -0.02
LRFN1-201ENST00000248668 TPRG1LQ5T0D9 272 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 ENPP7Q6UWV6 458 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 COMTD1Q86VU5 262 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 QRFPRQ96P65 431 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 IL4I1Q96RQ9 567 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 SEC14L3Q9UDX4 400 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 TBC1D29Q9UFV1 150 aa14.92□□□□□ -0.02
LRFN1-201ENST00000248668 EGFP01133 1207 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 HSMCR30P0CW71 290 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 ANXA8P13928 327 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 S100A1P23297 94 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 GRK3P35626 688 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 LSM11P83369 360 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 MAPK11Q15759 364 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 RPE65Q16518 533 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 TOR1AIP1Q5JTV8 583 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 ANKRD13BQ86YJ7 626 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 THSD1Q9NS62 852 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF226Q9NYT6 803 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 POFUT2Q9Y2G5 429 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 HSPE1-MOB4S4R3N1 261 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 ARHGEF17Q96PE2 2063 aaPredicted RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 CACNB4O00305 520 aaPredicted RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 SULT1C4O75897 302 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 DNAJB5O75953 348 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 CD36P16671 472 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 PKLRP30613 574 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 PIN1Q13526 163 aaPredicted RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 PTGES3Q15185 160 aaKnown RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 SEC23BQ15437 767 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 CADM3Q8N126 398 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 KIAA1958Q8N8K9 716 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 TREX2Q9BQ50 279 aaPredicted RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 PRR14Q9BWN1 585 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 NEUROD4Q9HD90 331 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 DZANK1Q9NVP4 752 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 HCN4Q9Y3Q4 1203 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 TRIM64BA6NI03 449 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 BTN3A3O00478 584 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 OR10H3O60404 316 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 FAAH2Q6GMR7 532 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 KIAA1161Q6NSJ0 714 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 TMEM107Q6UX40 140 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 KIAA1324Q6UXG2 1013 aaKnown RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 ZNF605Q86T29 641 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 IL17RCQ8NAC3 791 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 OR2L3Q8NG85 312 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 C16orf58Q96GQ5 468 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 SLC35G5Q96KT7 338 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 SEMA3GQ9NS98 782 aa14.91□□□□□ -0.02
LRFN1-201ENST00000248668 DNMT3AQ9Y6K1 912 aaPredicted RBP14.91□□□□□ -0.02
LRFN1-201ENST00000248668 A0A1W2PR48 441 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 MFN2O95140 757 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 NADKO95544 446 aaPredicted RBP14.9□□□□□ -0.02
LRFN1-201ENST00000248668 NTSR1P30989 418 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 CRISP3P54108 245 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 CXCR4P61073 352 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 PRSS48Q7RTY5 328 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 IGFN1Q86VF2 1251 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 ACOT4Q8N9L9 421 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 KCT2Q8NC54 265 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 GGHQ92820 318 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 AMDHD1Q96NU7 426 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 MCOLN1Q9GZU1 580 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SLC35C2Q9NQQ7 365 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 MS4A12Q9NXJ0 267 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 PCDHGA3Q9Y5H0 932 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 A0A0A6YYD5 115 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 NOTOA8MTQ0 251 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 INHBBP09529 407 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 RHCEP18577 417 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 LIPAP38571 399 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 CAMK2BQ13554 666 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SLC9A5Q14940 896 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SOWAHCQ53LP3 525 aaPredicted RBP14.9□□□□□ -0.02
LRFN1-201ENST00000248668 LCN9Q8WX39 176 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 DDX31Q9H8H2 851 aaKnown RBP14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SLC17A4Q9Y2C5 497 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 EIF2DP41214 584 aaKnown RBP14.9□□□□□ -0.02
LRFN1-201ENST00000248668 DNASE1L3Q13609 305 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 TCTN3Q6NUS6 607 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 BCDIN3DQ7Z5W3 292 aaKnown RBP14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SHISA5Q8N114 240 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 STX19Q8N4C7 294 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 SVOPQ8N4V2 548 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 FLCNQ8NFG4 579 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 RHOXF1Q8NHV9 184 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 OR1E3Q8WZA6 343 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 COL26A1Q96A83 441 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 MS4A6EQ96DS6 147 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 KCNE3Q9Y6H6 103 aa14.9□□□□□ -0.02
LRFN1-201ENST00000248668 PRSS38A1L453 326 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 H3BN98 237 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 FRS3O43559 492 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 PLRG1O43660 514 aaKnown RBP14.89□□□□□ -0.03
LRFN1-201ENST00000248668 CLEC3AO75596 197 aa14.89□□□□□ -0.03
LRFN1-201ENST00000248668 PTNP21246 168 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms