RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 SELENBP1Q13228 472 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 OR2G6Q5TZ20 316 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 PODNL1Q6PEZ8 512 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 TMEM107Q6UX40 140 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LAX1Q8IWV1 398 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 ANKRD53Q8N9V6 530 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 GATAD2BQ8WXI9 593 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CNIH4Q9P003 139 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 H2AFY2Q9P0M6 372 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MKLN1Q9UL63 735 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 FFAR1O14842 300 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 HAT1O14929 419 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CASKO14936 926 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 RPS19P39019 145 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 VEGFBP49765 207 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 GPR19Q15760 415 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 OR8J1Q8NGP2 316 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 KAT2AQ92830 837 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MTERF3Q96E29 417 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 LRRC3BQ96PB8 259 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 MND1Q9BWT6 205 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 PRRG3Q9BZD7 231 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 CXXC1Q9P0U4 656 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 DKK3Q9UBP4 350 aa11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 YARS2Q9Y2Z4 477 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-201ENST00000247833 SERTM1A2A2V5 107 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 ZAR1LA6NP61 321 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 LILRB3O75022 631 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 KCNK2O95069 426 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 CD72P21854 359 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 DDX6P26196 483 aaKnown RBP eCLIP11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 HOXD12P35452 270 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 TIE1P35590 1138 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 UGT2B10P36537 528 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 ZMAT1Q5H9K5 638 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 UNC5DQ6UXZ4 953 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 NRARPQ7Z6K4 114 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 PDZD3Q86UT5 571 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 GPR32P1Q8NGA4 272 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 PIK3R3Q92569 461 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 COQ10AQ96MF6 247 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 WFDC6Q9BQY6 131 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 WDR37Q9Y2I8 494 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SH3D21A4FU49 640 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 FAAHO00519 579 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC31A1O15431 190 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 LRRTM2O43300 516 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SLITRK5O94991 958 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 CLEC2LP0C7M8 214 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SGCGQ13326 291 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC9A5Q14940 896 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 MTSS1LQ765P7 747 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 GDPD3Q7L5L3 318 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SETD7Q8WTS6 366 aaKnown RBP11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 PDXPQ96GD0 296 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF221Q9UK13 617 aa11.94□□□□□ -0.5
RAB3IP-201ENST00000247833 FABP12A6NFH5 140 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 A6NL46 340 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 HEPACAM2A8MVW5 462 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 CSO75390 466 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MOSPD3O75425 235 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ITGB7P26010 798 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 RGS8P57771 180 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SLAMF1Q13291 335 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SMARCD3Q6STE5 483 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 VN1R5Q7Z5H4 357 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SCAIQ8N9R8 606 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 WFIKKN2Q8TEU8 576 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 DACT3Q96B18 629 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 C16orf58Q96GQ5 468 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TBX5Q99593 518 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TM9SF2Q99805 663 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MS4A8Q9BY19 250 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 IGFLR1Q9H665 355 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 EGLN3Q9H6Z9 239 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SP140LQ9H930 580 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 CLCA2Q9UQC9 943 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 HMGN4O00479 90 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 PRKYO43930 277 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 LCMT2O60294 686 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 NFATC1O95644 943 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 HMGN2P05204 90 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TUBA3EQ6PEY2 450 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 LCTLQ6UWM7 567 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 IKBIPQ70UQ0 350 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms