RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NTMQ9P121 344 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 CES1P1Q9UKY3 287 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 DAPP1Q9UN19 280 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 PLCL2Q9UPR0 1127 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 ANGPT4Q9Y264 503 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
SLIRP-201ENST00000238688 A0A0J9YVX5 310 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 RNF103-CHMP3A0A140T963 221 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 A0A1W2PR48 441 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ASNA1O43681 348 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 AIFM1O95831 613 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 FHP07954 510 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ZNF888P0CJ79 500 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ARAFP10398 606 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PEX2P28328 305 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 KDELR2P33947 212 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PRIM2P49643 509 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 MVDP53602 400 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 MAZP56270 477 aaKnown RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 BTN3A2P78410 334 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 SPIDRQ14159 915 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ADRM1Q16186 407 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ANKRD26P1Q6NSI1 321 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PPP4R4Q6NUP7 873 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 MED25Q71SY5 747 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 CBLL1Q75N03 491 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 EIF3MQ7L2H7 374 aaKnown RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PRSS42Q7Z5A4 293 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PTOV1Q86YD1 416 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 LILRA2Q8N149 483 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 DNAJC22Q8N4W6 341 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 NUDT8Q8WV74 236 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 JPH3Q8WXH2 748 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 CIDECQ96AQ7 238 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 AURKBQ96GD4 344 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PYURFQ96I23 114 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 SLC46A1Q96NT5 459 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PKP2Q99959 881 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 CHID1Q9BWS9 393 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 SORBS1Q9BX66 1292 aaKnown RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ANKHQ9HCJ1 492 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PDE7BQ9NP56 450 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 A4GALTQ9NPC4 353 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 KCMF1Q9P0J7 381 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 DNAJB9Q9UBS3 223 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 ZNF639Q9UID6 485 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 MRPS33Q9Y291 106 aaKnown RBP12.43□□□□□ -0.42
SLIRP-201ENST00000238688 PCDHGA8Q9Y5G5 932 aa12.43□□□□□ -0.42
SLIRP-201ENST00000238688 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 FITM1A5D6W6 292 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CDRT15L2A8MXV6 281 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CLOCKO15516 846 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 RRP8O43159 456 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 GALR3O60755 368 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 C9P02748 559 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CPN2P22792 545 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CERS1P27544 350 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CRATP43155 626 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 KHKP50053 298 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 DSTNP60981 165 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 EPS8Q12929 822 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 COL9A2Q14055 689 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CRB2Q5IJ48 1285 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 LRRC69Q6ZNQ3 347 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 USP53Q70EK8 1073 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 PIWIL3Q7Z3Z3 882 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 MCATQ8IVS2 390 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 ZC3H7AQ8IWR0 971 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 FAM20CQ8IXL6 584 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 LRTOMTQ8WZ04 291 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 EXOSC8Q96B26 276 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 SDCCAG3Q96C92 435 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 SLC47A1Q96FL8 570 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
SLIRP-201ENST00000238688 OSBPL11Q9BXB4 747 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 TRIM4Q9C037 500 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 LRRN3Q9H3W5 708 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 CALML5Q9NZT1 146 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 ERVK-11Q9UQG0 969 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 ATG4BQ9Y4P1 393 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 RNF215Q9Y6U7 377 aa12.42□□□□□ -0.42
SLIRP-201ENST00000238688 IGHV1OR21-1A0A087WYE8 117 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 DUXAA6NLW8 204 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 D6RAR5 112 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 H0YIG0 161 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 PLOD2O00469 737 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 SUV39H1O43463 412 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 NSA2O95478 260 aaKnown RBP12.41□□□□□ -0.42
SLIRP-201ENST00000238688 HPRP00739 348 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 SERPINA1P01009 418 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 RPLP0P05388 317 aaKnown RBP12.41□□□□□ -0.42
SLIRP-201ENST00000238688 UQCRBP14927 111 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 ST6GAL1P15907 406 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 NCK1P16333 377 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 TYRP1P17643 537 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 GPC1P35052 558 aa12.41□□□□□ -0.42
SLIRP-201ENST00000238688 SOAT1P35610 550 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms