RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SPNS1Q9H2V7 528 aa8.94□□□□□ -0.98
HLA-DOA-201ENST00000229829 SCPEP1Q9HB40 452 aa8.94□□□□□ -0.98
HLA-DOA-201ENST00000229829 FANCFQ9NPI8 374 aa8.94□□□□□ -0.98
HLA-DOA-201ENST00000229829 EIF3KQ9UBQ5 218 aaKnown RBP8.94□□□□□ -0.98
HLA-DOA-201ENST00000229829 HS3ST2Q9Y278 367 aa8.94□□□□□ -0.98
HLA-DOA-201ENST00000229829 ISM1B1AKI9 464 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 UGDHO60701 494 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 KLHL18O94889 574 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 APOL3O95236 402 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 GASTP01350 101 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 FEN1P39748 380 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 KIR2DL3P43628 341 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 HNRNPA0Q13151 305 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 MLIPQ5VWP3 458 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 HTR3DQ70Z44 454 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RASGRP3Q8IV61 690 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ATP6V1C2Q8NEY4 427 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RNF170Q96K19 258 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ANKHQ9HCJ1 492 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 C1GALT1Q9NS00 363 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 NPAP1Q9NZP6 1156 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 A0A1B0GVC2 190 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 A6NIN4 97 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 POP4O95707 220 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ANXA8P13928 327 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 APEX1P27695 318 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 GPC1P35052 558 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 C21orf58P58505 322 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 TEAD4Q15561 434 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM65Q6PI78 240 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 KIF18BQ86Y91 864 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 LRRC17Q8N6Y2 441 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF366Q8N895 744 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 AQP11Q8NBQ7 271 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF740Q8NDX6 193 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 OR2A12Q8NGT7 310 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 HERVK_113Q902F9 699 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ST8SIA4Q92187 359 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM159Q96B96 161 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RADILQ96JH8 1075 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 NRTNQ99748 197 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CCDC32Q9BV29 185 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 NKIRAS2Q9NYR9 191 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 GULP1Q9UBP9 304 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF282Q9UDV7 671 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RAB23Q9ULC3 237 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 BAIAP2Q9UQB8 552 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 POFUT2Q9Y2G5 429 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 TEX51A0A1B0GUA7 166 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 A0A1W2PQL4 384 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 LEFTY2O00292 366 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RNASET2O00584 256 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 KDM4BO94953 1096 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CTSAP10619 480 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CNR2P34972 360 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RPS19P39019 145 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ASMTP46597 345 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 PXNP49023 591 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 MAP2K6P52564 334 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RPS26P62854 115 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CDK6Q00534 326 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RAB33AQ14088 237 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 LRRC32Q14392 662 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 SYTL3Q4VX76 610 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ANXA8L1Q5VT79 327 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 BRAT1Q6PJG6 821 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 GDPD4Q6W3E5 623 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLCO4C1Q6ZQN7 724 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 KRT74Q7RTS7 529 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 COMMD6Q7Z4G1 85 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 BCDIN3DQ7Z5W3 292 aaKnown RBP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 LUZP2Q86TE4 346 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 JAZF1Q86VZ6 243 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 OTULINQ96BN8 352 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 TMEM169Q96HH4 297 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 RAD9AQ99638 391 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 MED28Q9H204 178 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ING4Q9UNL4 249 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 CKAP5Q14008 2032 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 ARID1AO14497 2285 aa8.93□□□□□ -0.98
HLA-DOA-201ENST00000229829 SIGLEC5O15389 551 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 GPX5O75715 221 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 URODP06132 367 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SLC2A2P11168 524 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CD72P21854 359 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 MAP2K3P46734 347 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SP3Q02447 781 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SIGLEC14Q08ET2 396 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 SSX1Q16384 188 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 GCNT6Q5T4J0 391 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 LCN1P1Q5VSP4 162 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 CAMKMTQ7Z624 323 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ATCAYQ86WG3 371 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 KRT73Q86Y46 540 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 C2orf73Q8N5S3 287 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 DENND6BQ8NEG7 585 aa8.92□□□□□ -0.98
HLA-DOA-201ENST00000229829 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms