RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 KEAP1Q14145 624 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SPIDRQ14159 915 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ELOCQ15369 112 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 NKG7Q16617 165 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 IFI44LQ53G44 452 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 KIAA1614Q5VZ46 1190 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 KDM4DQ6B0I6 523 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SLC48A1Q6P1K1 146 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 DNAJC14Q6Y2X3 702 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 TMEM26Q6ZUK4 368 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ABHD13Q7L211 337 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 TSPYL5Q86VY4 417 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 CARFQ8N187 725 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 C10orf111Q8N326 155 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 LINC00471Q8N535 108 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 OR56A1Q8NGH5 318 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 HDAC2Q92769 488 aaKnown RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 TEFMQ96QE5 360 aaKnown RBP10.07□□□□□ -0.8
CDCA3-201ENST00000229265 BTBD2Q9BX70 525 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 TRIM4Q9C037 500 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 RAB33BQ9H082 229 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 XKR8Q9H6D3 395 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 REEP1Q9H902 201 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ENAMQ9NRM1 1142 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 BLOC1S6Q9UL45 172 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 LIPT1Q9Y234 373 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 PCDHGB2Q9Y5G2 931 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SLC22A7Q9Y694 548 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ZNF780BQ9Y6R6 833 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 SPACA6W5XKT8 324 aa10.07□□□□□ -0.8
CDCA3-201ENST00000229265 ANKRD11Q6UB99 2663 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 LOC100130705A0A1B0GUX0 176 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GSAPA4D1B5 854 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ARRDC5A6NEK1 342 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 HNRNPCL2B2RXH8 293 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PLOD2O00469 737 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 BTN3A3O00478 584 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 HAT1O14929 419 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ERI3O43414 337 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TMPRSS11DO60235 418 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GCM2O75603 506 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 C9P02748 559 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GBAP04062 536 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 CSF2P04141 144 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 NTRK1P04629 796 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 CCDC159P0C7I6 412 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 THEGLP0DJG4 465 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 AK4P27144 223 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PSMB5P28074 263 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PEBP1P30086 187 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ALDH3B2P48448 385 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PRR5P85299 388 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TEKQ02763 1124 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TP53BP2Q13625 1128 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 LRRC23Q53EV4 343 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ANKRD26P1Q6NSI1 321 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TMEM214Q6NUQ4 689 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 DUS1LQ6P1R4 473 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 OGFOD3Q6PK18 319 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TBPL2Q6SJ96 375 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 TMPRSS7Q7RTY8 843 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 RD3Q7Z3Z2 195 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PARGQ86W56 976 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GKN2Q86XP6 184 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 C8orf59Q8N0T1 100 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 PIK3C3Q8NEB9 887 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GEMIN6Q8WXD5 167 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 AMDHD1Q96NU7 426 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ZFYVE21Q9BQ24 234 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 CXorf36Q9H7Y0 433 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 GIN1Q9NXP7 522 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 SPHK1Q9NYA1 384 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ACTR10Q9NZ32 417 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 UTS2RQ9UKP6 389 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
CDCA3-201ENST00000229265 ATMQ13315 3056 aa10.06□□□□□ -0.8
CDCA3-201ENST00000229265 A0A0J9YY10 115 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 FLRT2O43155 660 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 EMC8O43402 210 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 TLX3O43711 291 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-201ENST00000229265 SH3BGRLO75368 114 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 PGM3O95394 542 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 SNAP29O95721 258 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 FHP07954 510 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 GUSBP08236 651 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 ETFAP13804 333 aa10.05□□□□□ -0.8
CDCA3-201ENST00000229265 UGT2B7P16662 529 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms