RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 USP30Q70CQ3 517 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 TECPR1Q7Z6L1 1165 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 NOXA1Q86UR1 476 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 TEFMQ96QE5 360 aaKnown RBP16.57■□□□□ 0.24
PRPF19-201ENST00000227524 FUZQ9BT04 418 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 RANGRFQ9HD47 186 aaPredicted RBP16.57■□□□□ 0.24
PRPF19-201ENST00000227524 SLAMF7Q9NQ25 335 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 SEMA3GQ9NS98 782 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 TVP23BQ9NYZ1 205 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 NUFIP1Q9UHK0 495 aaKnown RBP16.57■□□□□ 0.24
PRPF19-201ENST00000227524 MAU2Q9Y6X3 613 aa16.57■□□□□ 0.24
PRPF19-201ENST00000227524 CEP290O15078 2479 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 FABP12A6NFH5 140 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 B4DXG7 233 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 SEC14L5O43304 696 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 PRKYO43930 277 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 ETV5P41161 510 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 ETV1P50549 477 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 NTHL1P78549 312 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
PRPF19-201ENST00000227524 FLYWCH1Q4VC44 716 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 SLC35F1Q5T1Q4 408 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 PDZK1Q5T2W1 519 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 TMEM25Q86YD3 366 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 LRRC56Q8IYG6 542 aaPredicted RBP16.56■□□□□ 0.24
PRPF19-201ENST00000227524 GDPD1Q8N9F7 314 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 DIRAS2Q96HU8 199 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 ZNF354BQ96LW1 612 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 SLA2Q9H6Q3 261 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 HCFC2Q9Y5Z7 792 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 ATG2AQ2TAZ0 1938 aa16.56■□□□□ 0.24
PRPF19-201ENST00000227524 A0A0B4J293 547 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 ANKDD1BA6NHY2 528 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TMCC2O75069 709 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 PDE9AO76083 593 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 ALPPP05187 535 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 YES1P07947 543 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TNNI3P19429 210 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 MYL9P24844 172 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TAP2Q03519 686 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 ATAT1Q5SQI0 421 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 FAM26EQ8N5C1 309 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 OR9A1PQ8NGU1 263 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 RAB8BQ92930 207 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 RNF31Q96EP0 1072 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 FYTTD1Q96QD9 318 aaKnown RBP16.55■□□□□ 0.24
PRPF19-201ENST00000227524 WFDC6Q9BQY6 131 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 POLDIP3Q9BY77 421 aaKnown RBP16.55■□□□□ 0.24
PRPF19-201ENST00000227524 ACAD8Q9UKU7 415 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TSPAN11A1L157 253 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 NEDD8-MDP1E9PL57 170 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TLX2O43763 284 aaPredicted RBP16.55■□□□□ 0.24
PRPF19-201ENST00000227524 FHP07954 510 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 KCNJ5P48544 419 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 HSDL2Q6YN16 418 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 DPPA4Q7L190 304 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 ZNF438Q7Z4V0 828 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 CFAP206Q8IYR0 622 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 SLC7A13Q8TCU3 470 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 OR5P2Q8WZ92 322 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TMEM203Q969S6 136 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 AP2M1Q96CW1 435 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 MVB12BQ9H7P6 319 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 RNF121Q9H920 327 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 TESQ9UGI8 421 aaKnown RBP16.55■□□□□ 0.24
PRPF19-201ENST00000227524 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
PRPF19-201ENST00000227524 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 DDX5P17844 614 aaKnown RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 MLLT3P42568 568 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SLC9A3P48764 834 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 BNC1Q01954 994 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 ALDH6A1Q02252 535 aaKnown RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SYT14P1Q58G82 188 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 DDI2Q5TDH0 399 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 TMIGD1Q6UXZ0 262 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SLC9B2Q86UD5 537 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 KIAA1143Q96AT1 154 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 FRMD6Q96NE9 622 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 YARS2Q9Y2Z4 477 aaKnown RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SPIN1Q9Y657 262 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 ANHXE9PGG2 379 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 CACNB4O00305 520 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SH3BP5O60239 455 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 B4GALT2O60909 372 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 NME6O75414 186 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 CSF2P04141 144 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 CHRM5P08912 532 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 TSPAN19P0C672 248 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 DDCP20711 480 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 XPAP23025 273 aaPredicted RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SDC2P34741 201 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 MANFP55145 182 aaKnown RBP16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SMIM11AP58511 58 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 HOXC5Q00444 222 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 PYDC2Q56P42 97 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 YIF1BQ5BJH7 314 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 SNAP47Q5SQN1 464 aa16.54■□□□□ 0.24
PRPF19-201ENST00000227524 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms