RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 C11orf65Q8NCR3 313 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 SLC9A6Q92581 669 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TRMT2BQ96GJ1 504 aaKnown RBP13.38□□□□□ -0.27
SF1-201ENST00000227503 FERD3LQ96RJ6 166 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TMED9Q9BVK6 235 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LIN7BQ9HAP6 207 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 SLC9A8Q9Y2E8 581 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 SOCS5O75159 536 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LATS1O95835 1130 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 CCR7P32248 378 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 NSG1P42857 185 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 VEZF1Q14119 521 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 GGTA1PQ4G0N0 100 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TMEM91Q6ZNR0 172 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 TRILQ7L0X0 811 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KRT74Q7RTS7 529 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KANSL1Q7Z3B3 1105 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ADGRD2Q7Z7M1 963 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 KLHL15Q96M94 604 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 RBCK1Q9BYM8 510 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 AUP1Q9Y679 476 aa13.38□□□□□ -0.27
SF1-201ENST00000227503 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 SH3D21A4FU49 640 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 NPIPB15A6NHN6 443 aaPredicted RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 HRO43593 1189 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 TPOP07202 933 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 CSNK1DP48730 415 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 MTAPQ13126 283 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 RETSATQ6NUM9 610 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 BHLHB9Q6PI77 547 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 Q6ZNB5 142 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 ZNF461Q8TAF7 563 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 MARVELD3Q96A59 401 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 CMTM7Q96FZ5 175 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 CPNE7Q9UBL6 633 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 CASP8AP2Q9UKL3 1982 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 QSOX1O00391 747 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 PRKYO43930 277 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 HCN1O60741 890 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 ETHE1O95571 254 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 PRPS1L1P21108 318 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 GRK1Q15835 563 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 TAF12Q16514 161 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 ATP13A5Q4VNC0 1218 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 RPS26P11Q5JNZ5 115 aaPredicted RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 CRTC1Q6UUV9 634 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 ZNF782Q6ZMW2 699 aaPredicted RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 LRRC70Q7Z2Q7 622 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 CLDN22Q8N7P3 220 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 RBPMSQ93062 196 aaKnown RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 SAP130Q9H0E3 1048 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
SF1-201ENST00000227503 CLEC4AQ9UMR7 237 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 TET1Q8NFU7 2136 aa13.37□□□□□ -0.27
SF1-201ENST00000227503 NPIPB8E9PQR5 432 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 FFAR1O14842 300 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 TRIM3O75382 744 aaPredicted RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 RGS11O94810 467 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 LALBAP00709 142 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 KELP23276 732 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 CFL1P23528 166 aaKnown RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 HOXD10P28358 340 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 SLC6A12P48065 614 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 SCARB2Q14108 478 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 HSDL2Q6YN16 418 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 UBE2R2Q712K3 238 aaPredicted RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 RBM45Q8IUH3 476 aaKnown RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 OR52I1Q8NGK6 324 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 UCN3Q969E3 161 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 ZC3HAV1LQ96H79 300 aaKnown RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 LYSMD1Q96S90 227 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 SLC12A9Q9BXP2 914 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 ZDHHC3Q9NYG2 299 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 CLEC4EQ9ULY5 219 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 GPR52Q9Y2T5 361 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 C1orf226A1L170 272 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 CD8B2A6NJW9 211 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 HOXA2O43364 376 aa13.36□□□□□ -0.27
SF1-201ENST00000227503 MTRF1O75570 445 aaKnown RBP13.36□□□□□ -0.27
SF1-201ENST00000227503 PROS1P07225 676 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms