RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TCF7L1Q9HCS4 588 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 RGS17Q9UGC6 210 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 A8MUA0 341 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 NUPL2O15504 423 aaKnown RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 JRKO75564 520 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 NCR1O76036 304 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 GABARAPO95166 117 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 GASTP01350 101 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 HMGN1P05114 100 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 CHMP24386 653 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 RBBP4Q09028 425 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SYPL1Q16563 259 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 DEFB134Q4QY38 66 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 XKR7Q5GH72 579 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 CNIH2Q6PI25 160 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 RSPO2Q6UXX9 243 aaPredicted RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 DNAJC22Q8N4W6 341 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 GAL3ST4Q96RP7 486 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SRMSQ9H3Y6 488 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 WDR26Q9H7D7 661 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 NLGN3Q9NZ94 848 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 STUB1Q9UNE7 303 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 MCM3APO60318 1980 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SPTBP11277 2137 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 URADA6NGE7 173 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 ANKRD28O15084 1053 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF30P17039 623 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 HK1P19367 917 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 EMP3P54852 163 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 PLBD1Q6P4A8 553 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 TMED4Q7Z7H5 227 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF385DQ9H6B1 395 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 VNN3Q9NY84 501 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 PPT2Q9UMR5 302 aa13.09□□□□□ -0.31
NFKB1-201ENST00000226574 YARS2Q9Y2Z4 477 aaKnown RBP13.09□□□□□ -0.31
NFKB1-201ENST00000226574 EDNRAP25101 427 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.31
NFKB1-201ENST00000226574 APEX1P27695 318 aaKnown RBP13.08□□□□□ -0.31
NFKB1-201ENST00000226574 ACADLP28330 430 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 PIK3CBP42338 1070 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.31
NFKB1-201ENST00000226574 GMFBP60983 142 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 RACK1P63244 317 aaKnown RBP13.08□□□□□ -0.31
NFKB1-201ENST00000226574 DEFA5Q01523 94 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 MANEALQ5VSG8 457 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 SLC36A4Q6YBV0 504 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 OAFQ86UD1 273 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 DEDD2Q8WXF8 326 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 ANKHQ9HCJ1 492 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 GNG8Q9UK08 70 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 OR1A2Q9Y585 309 aa13.08□□□□□ -0.31
NFKB1-201ENST00000226574 TRBV4-1A0A0J9YWV2 114 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 SOD2P04179 222 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 UQCRC1P31930 480 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 SLC35A2P78381 396 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
NFKB1-201ENST00000226574 LRRC26Q2I0M4 334 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ASB11Q8WXH4 323 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ECHDC3Q96DC8 303 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF514Q96K75 400 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-201ENST00000226574 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 NDC1Q9BTX1 674 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 DPAGT1Q9H3H5 408 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 C12orf4Q9NQ89 552 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 SLC35C2Q9NQQ7 365 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 TCRBV5S2A0A599 114 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ANXA2P2A6NMY6 339 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ANXA2P07355 339 aaKnown RBP13.08□□□□□ -0.32
NFKB1-201ENST00000226574 OSMP13725 252 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 PSMB5P28074 263 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 DSG2Q14126 1118 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 XKR4Q5GH76 650 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 MLIPQ5VWP3 458 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 GALNTL5Q7Z4T8 443 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF480Q8WV37 535 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
NFKB1-201ENST00000226574 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
NFKB1-201ENST00000226574 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms