RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ZNF721Q8TF20 911 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 FBXL20Q96IG2 436 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 LIN28AQ9H9Z2 209 aaKnown RBP13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 CXorf21Q9HAI6 301 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 GIMAP4Q9NUV9 329 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 ABI3Q9P2A4 366 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 EXO1Q9UQ84 846 aaKnown RBP13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 TNRC6AQ8NDV7 1962 aaKnown RBP13.67□□□□□ -0.22
PCOLCE-201ENST00000223061 B8ZZF3 427 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 KLF11O14901 512 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 ZFAND5O76080 213 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 CT62P0C5K7 136 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 MAPK1P28482 360 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 LTB4RQ15722 352 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 PRSS53Q2L4Q9 553 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 ANKRD26P1Q6NSI1 321 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 C16orf47Q6ZP98 133 aaPredicted RBP13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 PRICKLE2Q7Z3G6 844 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 LIX1Q8N485 282 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 CATSPER1Q8NEC5 780 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 ADCY4Q8NFM4 1077 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 CHMP6Q96FZ7 201 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 ART5Q96L15 291 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 ZNF681Q96N22 645 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 BRINP2Q9C0B6 783 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 AKTIPQ9H8T0 292 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 B3GNT3Q9Y2A9 372 aa13.66□□□□□ -0.22
PCOLCE-201ENST00000223061 GABRR3A8MPY1 467 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 IGKV3-11P04433 115 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 ATP1B1P05026 303 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 SSTR4P31391 388 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 GALNSP34059 522 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 MLF1P58340 268 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 IL23RQ5VWK5 629 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 CCDC116Q8IYX3 515 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 ZNF317Q96PQ6 595 aaPredicted RBP13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 ANAPC2Q9UJX6 822 aa13.65□□□□□ -0.22
PCOLCE-201ENST00000223061 OR5H15A6NDH6 313 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 ASMTP46597 345 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 CORO7P57737 925 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 RNF4P78317 190 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 OC90Q02509 493 aaPredicted RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 PTGR1Q14914 329 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 PLEKHN1Q494U1 663 aaPredicted RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 FAM111BQ6SJ93 734 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 RNF111Q6ZNA4 994 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 WDR75Q8IWA0 830 aaKnown RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 C9orf40Q8IXQ3 194 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 SAMD14Q8IZD0 417 aaPredicted RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 LGI4Q8N135 537 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 OR9A2Q8NGT5 310 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 HAS2Q92819 552 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 PNPLA2Q96AD5 504 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 MEAF6Q9HAF1 191 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 SLAMF7Q9NQ25 335 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 EIF3LQ9Y262 564 aaKnown RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 WWP2O00308 870 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 FCHO1O14526 889 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 HDAC3O15379 428 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 SUV39H1O43463 412 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 DRD4P21917 467 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 TNFSF10P50591 281 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 TUBA3CQ13748 450 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 TLR1Q15399 786 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 PRICKLE4Q2TBC4 344 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 TUBA3EQ6PEY2 450 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 Q6ZS92 163 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 VWA5B2Q8N398 1253 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 Q8NA96 180 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 PPCDCQ96CD2 204 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 GAL3ST4Q96RP7 486 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 UTP23Q9BRU9 249 aaKnown RBP13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 RNF32Q9H0A6 362 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 RABEP2Q9H5N1 569 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 REEP4Q9H6H4 257 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 SLCO1B3Q9NPD5 702 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 MAT2BQ9NZL9 334 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 MYOTQ9UBF9 498 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 DOCK10Q96BY6 2186 aa13.64□□□□□ -0.23
PCOLCE-201ENST00000223061 GOLGA8QA0A0J9YX86 632 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 GOLGA8OA6NCC3 632 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 TMEM200CA6NKL6 621 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 TRPC5OSA6NMA1 111 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 GOLGA8NF8WBI6 632 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 SDHDO14521 159 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 VPS4BO75351 444 aa13.63□□□□□ -0.23
PCOLCE-201ENST00000223061 ITGA10O75578 1167 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms