RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GCGRP47871 477 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 AKR1D1P51857 326 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 TUBA1BP68363 451 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 TUBA4AP68366 448 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 TUBA1AQ71U36 451 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 SRPK3Q9UPE1 567 aa18.08■□□□□ 0.48
SMPD3-201ENST00000219334 GRB7Q14451 532 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ALG10BQ5I7T1 473 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 NPWQ8N729 165 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 NLGN4YQ8NFZ3 816 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SERINC2Q96SA4 455 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 PITX2Q99697 317 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF700Q9H0M5 742 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SH2B3Q9UQQ2 575 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 KIR2DS5A0A0G2JLQ3 304 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 A0A0G2JNG1 304 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 TMEM189-UBE2V1I3L0A0 370 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 KIR2DS3K7RE56 304 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SDHDO14521 159 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 VNN2O95498 520 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 KDELR2P33947 212 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 KIR2DS5Q14953 304 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SLC5A8Q8N695 610 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 NAT6Q93015 286 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 PGAP3Q96FM1 320 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 MSLNLQ96KJ4 702 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 URM1Q9BTM9 101 aaKnown RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 MYO9BQ13459 2157 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 C13orf42A0A1B0GVH6 325 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 CD63P08962 238 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 NAA10P41227 235 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 BLMHQ13867 455 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 TRIM73Q86UV7 250 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ARHGAP12Q8IWW6 846 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 CLEC1AQ8NC01 280 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 CREB3L4Q8TEY5 395 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SPRYD4Q8WW59 207 aaPredicted RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SLC12A9Q9BXP2 914 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 KCNS2Q9ULS6 477 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SCAMP2O15127 329 aaKnown RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 SLC16A8O95907 504 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ALDOAP04075 364 aaKnown RBP18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF12P17014 697 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 THBS2P35442 1172 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ARG2P78540 354 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 MEP1AQ16819 746 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 ZBED5Q49AG3 693 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 HMGN2P46Q86SG4 172 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 BOCQ9BWV1 1114 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 AIG1Q9NVV5 245 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 MKS1Q9NXB0 559 aa18.07■□□□□ 0.48
SMPD3-201ENST00000219334 FCER2P06734 321 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CD3GP09693 182 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 PABPC4LP0CB38 370 aaKnown RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 RPS26P62854 115 aaKnown RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 TIGD4Q8IY51 512 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 TCEAL3Q969E4 200 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 ACTR10Q9NZ32 417 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 GGT3PA6NGU5 568 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 ABCB7O75027 752 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 TUBA3EQ6PEY2 450 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CBARPQ8N350 705 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CPXM2Q8N436 756 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 FBXL8Q96CD0 374 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CCNL2Q96S94 520 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 A0A1B0GVC2 190 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF28P17035 718 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 GJA5P36382 358 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CLDN8P56748 225 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CHRFAM7AQ494W8 412 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 ARHGAP11AQ6P4F7 1023 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 SCD5Q86SK9 330 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 KATNBL1Q9H079 304 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 MKLN1Q9UL63 735 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 A0A0J9YY10 115 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 SH3D21A4FU49 640 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 GJA8P48165 433 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 RIDAP52758 137 aaKnown RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 SFXN2Q96NB2 322 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 ALOXE3Q9BYJ1 711 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 CDH20Q9HBT6 801 aa18.06■□□□□ 0.48
SMPD3-201ENST00000219334 STOX2Q9P2F5 926 aaPredicted RBP18.06■□□□□ 0.48
SMPD3-201ENST00000219334 GNRHRP30968 328 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 HOXC13P31276 330 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 POU4F2Q12837 409 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 TRAM1Q15629 374 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ANKDD1AQ495B1 522 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 NDUFAF5Q5TEU4 345 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 HTR3DQ70Z44 454 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 PTRH2Q9Y3E5 179 aaKnown RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 A6NL46 340 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF43P17038 809 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 EXOC3L2Q2M3D2 409 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 OR5AR1Q8NGP9 310 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 HOXB13Q92826 284 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF224Q9NZL3 707 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 NUFIP1Q9UHK0 495 aaKnown RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 RNF6Q9Y252 685 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 E2F3O00716 465 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 CELP19835 753 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms