RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SCO2O43819 266 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 APOL3O95236 402 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PENKP01210 267 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FCER2P06734 321 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 GGT1P19440 569 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PTNP21246 168 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 NAA10P41227 235 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TAS2R38P59533 333 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ARF3P61204 181 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 CRYZQ08257 329 aaKnown RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 CDKL4Q5MAI5 379 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ZNF648Q5T619 568 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 SCML4Q8N228 414 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FIZ1Q96SL8 496 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PPP4R1LQ9P1A2 415 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 RP2O75695 350 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PRLP01236 227 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 IQCF3P0C7M6 154 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 BPIP17213 487 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FBLP22087 321 aaKnown RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 GSTM2P28161 218 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 CTBP2P56545 445 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 CLDN10P78369 228 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FUBP1Q96AE4 644 aaKnown RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 NANSQ9NR45 359 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TRBV2A0A0J9YWF9 115 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PLD2O14939 933 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 AURKAO14965 403 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 STSP08842 583 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 IVDP26440 423 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 CD97P48960 835 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 SH3BP2P78314 561 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 SGCAQ16586 387 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 UGT2A3Q6UWM9 527 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 METTL27Q8N6F8 245 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 NPWQ8N729 165 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 TRIB2Q92519 343 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FEVQ99581 238 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 SLC12A9Q9BXP2 914 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 FBRSQ9HAH7 460 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 BRF2Q9HAW0 419 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PTGDR2Q9Y5Y4 395 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 IGLON5A6NGN9 336 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 OR2B3O76000 313 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ZNF16P17020 682 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 C5AR1P21730 350 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ZBTB8BQ8NAP8 495 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 DPH2Q9BQC3 489 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 RANBP3Q9H6Z4 567 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 RXFP3Q9NSD7 469 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PIK3C2AO00443 1686 aa12.95□□□□□ -0.34
SF3A1-201ENST00000215793 PARP4Q9UKK3 1724 aaKnown RBP12.95□□□□□ -0.34
SF3A1-201ENST00000215793 ANHXE9PGG2 379 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 PHYHO14832 338 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 EEF1E1O43324 174 aaKnown RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 KIAA0513O60268 411 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 CD3GP09693 182 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 HOXA11P31270 313 aaPredicted RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 RHEBQ15382 184 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 FTMTQ8N4E7 242 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 MYRFLQ96LU7 910 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 ATG5Q9H1Y0 275 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 SRA1Q9HD15 236 aaKnown RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 JRKO75564 520 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 RPA4Q13156 261 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 SNTB2Q13425 540 aaKnown RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 RAB33AQ14088 237 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 ATXN7L3Q14CW9 347 aaPredicted RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 DENND6BQ8NEG7 585 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 APOBEC3BQ9UH17 382 aaKnown RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 STUB1Q9UNE7 303 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 GPR34Q9UPC5 381 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 KAT6AQ92794 2004 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 CSF2RAP15509 400 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 JUNDP17535 347 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 ADH7P40394 386 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 AFF1P51825 1210 aaKnown RBP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 GBX1Q14549 363 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 C22orf42Q6IC83 251 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 LRFN4Q6PJG9 635 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
SF3A1-201ENST00000215793 DEFB119Q8N690 84 aa12.94□□□□□ -0.34
SF3A1-201ENST00000215793 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms