RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LAG3P18627 525 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 PODNL1Q6PEZ8 512 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 IL20RBQ6UXL0 311 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 VN1R5Q7Z5H4 357 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 HOMEZQ8IX15 550 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 OR4F15Q8NGB8 312 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 OR6T1Q8NGN1 323 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 DNAJB8Q8NHS0 232 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF566Q969W8 418 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 TREX2Q9BQ50 279 aaPredicted RBP14.29□□□□□ -0.12
EFNB1-201ENST00000204961 SLC30A2Q9BRI3 323 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 PLA2G12AQ9BZM1 189 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 FBXO8Q9NRD0 319 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 GPSM3Q9Y4H4 160 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 OLFM2O95897 454 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 HBQ1P09105 142 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 PSMA1P25786 263 aaKnown RBP14.29□□□□□ -0.12
EFNB1-201ENST00000204961 MMP12P39900 470 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 PRLHRP49683 370 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF91Q05481 1191 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 SP140Q13342 867 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 C18orf63Q68DL7 685 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 LRRTM4Q86VH4 590 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 AMZ2Q86W34 360 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 KCT2Q8NC54 265 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 ATP6V1HQ9UI12 483 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
EFNB1-201ENST00000204961 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
EFNB1-201ENST00000204961 SLC2A10O95528 541 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ITGA2P17301 1181 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CASP3P42574 277 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 XCR1P46094 333 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 DEFA1P59665 94 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 DEFA3P59666 94 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CXCR4P61073 352 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 STXBP1P61764 594 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 LTB4RQ15722 352 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 TBCEQ15813 527 aaPredicted RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ARHGAP15Q53QZ3 475 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CCNJQ5T5M9 372 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 PLAG1Q6DJT9 500 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ZC3H14Q6PJT7 736 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 OXR1Q8N573 874 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 OR4K5Q8NGD3 323 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CPEB1Q9BZB8 566 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 MED20Q9H944 212 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SLC13A4Q9UKG4 626 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SPAG17Q6Q759 2223 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CD8B2A6NJW9 211 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 KLHL18O94889 574 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CD8BP10966 210 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 FAM71E1Q6IPT2 247 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 FAM46AQ96IP4 442 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 OPALINQ96PE5 141 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 HHATLQ9HCP6 504 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 MRPS7Q9Y2R9 242 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 WBP11Q9Y2W2 641 aaKnown RBP14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CSNK1G3Q9Y6M4 447 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SEMG1P04279 462 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CTSAP10619 480 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ETV5P41161 510 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ETV1P50549 477 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SMU1Q2TAY7 513 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 KLHL12Q53G59 568 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SLC9B2Q86UD5 537 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 VRK2Q86Y07 508 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 FAM46DQ8NEK8 389 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 VWCEQ96DN2 955 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 RSPRY1Q96DX4 576 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CITED4Q96RK1 184 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 DPH7Q9BTV6 452 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 ZDHHC5Q9C0B5 715 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 GABARAPL1Q9H0R8 117 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 CHST8Q9H2A9 424 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 SMURF1Q9HCE7 757 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 PCDHGB1Q9Y5G3 927 aa14.28□□□□□ -0.12
EFNB1-201ENST00000204961 A0A1W2PQL4 384 aaPredicted RBP14.27□□□□□ -0.12
EFNB1-201ENST00000204961 IFNA14P01570 189 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF30P17039 623 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 CELP19835 753 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 HEPACAMQ14CZ8 416 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 SNAP47Q5SQN1 464 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 PDZK1Q5T2W1 519 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 CNKSR3Q6P9H4 555 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 HSDL2Q6YN16 418 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 CCDC149Q6ZUS6 474 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 CPXM2Q8N436 756 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 REPS1Q96D71 796 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 MTERF3Q96E29 417 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 EFCAB11Q9BUY7 163 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 RC3H2Q9HBD1 1191 aaKnown RBP14.27□□□□□ -0.12
EFNB1-201ENST00000204961 BEX1Q9HBH7 125 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 TMEM45AQ9NWC5 275 aa14.27□□□□□ -0.12
EFNB1-201ENST00000204961 TP53BP1Q12888 1972 aaPredicted RBP14.27□□□□□ -0.12
EFNB1-201ENST00000204961 MAGEB4O15481 346 aaPredicted RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PRKNO60260 465 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms