RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SPACA6W5XKT8 324 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 XKP51811 444 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 KCNAB1Q14722 419 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 OR4N5Q8IXE1 308 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CARFQ8N187 725 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ZBTB44Q8NCP5 570 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TMEM52Q8NDY8 209 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 OR4K14Q8NGD5 310 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TBC1D20Q96BZ9 403 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 RMND5BQ96G75 393 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 C8orf4Q9NR00 106 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 COMMD3-BMI1R4GMX3 469 aa18.51■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LY6G6EA0A0G2JKS1 128 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CLOCKO15516 846 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 DEAF1O75398 565 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SEPHS1P49903 392 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ROR2Q01974 943 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 EIF3MQ7L2H7 374 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 VTCN1Q7Z7D3 282 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ZC3H7AQ8IWR0 971 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LRRC25Q8N386 305 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 NMD3Q96D46 503 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 VPS50Q96JG6 964 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 MAGED4Q96JG8 741 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 BDH2Q9BUT1 245 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 U3KQA8 63 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 RALGAPA1Q6GYQ0 2036 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 A0A0A6YYC8 382 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 I3L1I5 382 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HMGN4O00479 90 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FOXS1O43638 330 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SIGLEC6O43699 453 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 PRSS23O95084 383 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CLIC3O95833 236 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 MC3RP41968 323 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 MAGEA2P43356 314 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LTB4RQ15722 352 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 WDR74Q6RFH5 385 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SAMD14Q8IZD0 417 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TTC29Q8NA56 475 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 OR2I1PQ8NGU4 316 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SFXN5Q8TD22 340 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 MAGEE2Q8TD90 523 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 RAB8BQ92930 207 aa18.5■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TMEM229AB2RXF0 380 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FAM227AF5H4B4 570 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LDB3O75112 727 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HOXB6P17509 224 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 PCBP3P57721 371 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HSD11B2P80365 405 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FAM53BQ14153 422 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CYBRD1Q53TN4 286 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TRIM61Q5EBN2 209 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 TCTE1Q5JU00 501 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SNAP47Q5SQN1 464 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CEP76Q8TAP6 659 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SLC38A5Q8WUX1 472 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ELP4Q96EB1 424 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FBXL20Q96IG2 436 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HSH2DQ96JZ2 352 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SLC35G5Q96KT7 338 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CLK4Q9HAZ1 481 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 DNAAF2Q9NVR5 837 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 IRAK4Q9NWZ3 460 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SMPD3Q9NY59 655 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SEMA5BQ9P283 1151 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 WDFY3Q8IZQ1 3526 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HYKKA2RU49 373 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 YKT6O15498 198 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SEMG1P04279 462 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FHP07954 510 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SP9P0CG40 484 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 PNLIPP16233 465 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ZNF23P17027 643 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 PRKAG1P54619 331 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CDH15P55291 814 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 NDUFA9Q16795 377 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ZNF528Q3MIS6 628 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 GUSBP11Q6P575 273 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CCDC80Q76M96 950 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 OR5D16Q8NGK9 328 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 COL26A1Q96A83 441 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 NUDT22Q9BRQ3 303 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ANKRA2Q9H9E1 313 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CLCA2Q9UQC9 943 aa18.49■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CHST10O43529 356 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 FGF17O60258 216 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CST1P01037 141 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 HMGN2P05204 90 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 CPMP14384 443 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 RAB38P57729 211 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 PRR5P85299 388 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 ID2Q02363 134 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 MYBPC3Q14896 1274 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 LPAL2Q16609 132 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 GARNL3Q5VVW2 1013 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 BHLHB9Q6PI77 547 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 SLC23A3Q6PIS1 610 aa18.48■□□□□ 0.55
TNFRSF1A-201ENST00000162749 RABEPKQ7Z6M1 372 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms