RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gm8879F6R3J9 157 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fbxw9F8VPX2 458 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dhcr7O88455 471 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 P01637 128 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 FesP16879 822 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 GhrP16882 650 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rpl3P27659 403 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc19a1P41438 512 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fgf1P61148 155 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CiartQ3TQ03 375 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 S100a15aQ6S5I3 108 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cyp2r1Q6VVW9 501 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Carns1Q6ZPS2 827 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 SnupnQ80W37 358 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Crls1Q80ZM8 303 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zcchc3Q8BPK2 400 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fmo2Q8K2I3 535 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 St8sia6Q8K4T1 398 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr763Q8VGC1 309 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fig4Q91WF7 907 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 EtfaQ99LC5 333 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rnf138Q9CQE0 245 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hormad1Q9D5T7 392 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Med27Q9DB40 311 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nacc2Q9DCM7 586 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 CtszQ9WUU7 306 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hs3st4D3YVV6 449 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Csnk2a2O54833 350 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Timp1P12032 205 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Il13P20109 131 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Stmn2P55821 179 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Eif1adQ3THJ3 170 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dhrs11Q3U0B3 260 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc39a12Q5FWH7 689 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cnrip1Q5M8N0 164 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Brinp2Q6DFY8 783 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 ParpbpQ6IRT3 573 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Man1c1Q6NXK9 625 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Klhl13Q80TF4 654 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ikzf5Q8BU00 419 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lpcat2Q8BYI6 544 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vps4aQ8VEJ9 437 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Coro7Q9D2V7 922 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Sh2d4aQ9D7V1 421 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cyb5r1Q9DB73 305 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Bbs10Q9DBI2 713 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fstl3Q9EQC7 256 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mmp19Q9JHI0 527 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tas2r103Q9JKA3 312 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm20441G3UYJ7 252 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr618K7N6B3 318 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 2410141K09RikK7N769 464 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 RbpjlO08674 515 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Bcat2O35855 393 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 P01657 111 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Lrpap1P55302 360 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ica1P97411 478 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Nell1Q2VWQ2 810 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 1700012B07RikQ3V0S8 276 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Prdm4Q80V63 803 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Prr5Q812A5 387 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Mettl7a1Q8C6B0 244 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 EfhbQ8CDU5 853 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Oard1Q8R5F3 152 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Epm2aip1Q8VEH5 606 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gpr146Q99LE2 333 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pno1Q9CPS7 248 aaKnown RBP9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rbm18Q9CR83 190 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Bex4Q9CWT2 118 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rex1bdQ9CYZ6 169 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pbld1Q9DCG6 288 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tcf23Q9JLR5 209 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Cldn6Q9Z262 219 aa9.36□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Spg11Q3UHA3 2430 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gbp6A0A0G2JDV3 611 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Zfp873A0A1B0GT64 667 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Adh6bA0A1D5RMB0 384 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Vmn2r120E9PX34 856 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm609E9Q573 300 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Dok2O70469 412 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 AlplP09242 524 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Wnt3P17553 355 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Hspa1bP17879 642 aaKnown RBP9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Defa8P50706 81 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fgf17P63075 216 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Alg6Q3TAE8 507 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc39a9Q8BFU1 308 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Pgs1Q8BHF7 553 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ankmy1Q8C0W1 906 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Tnfaip8l1Q8K288 186 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Olfr700Q8VFM5 316 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Slc3a1Q91WV7 685 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Rcc1lQ9CYF5 461 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Ndufaf4Q9D1H6 173 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 MeltfQ9R0R1 738 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 KalrnA2CG49 2964 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Loxhd1C8YR32 2068 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 L3mbtl1A2A5N8 826 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Gm43302L7N1X8 611 aa9.35□□□□□ -0.91
Ccdc38-201ENSMUST00000092215 Fpr-s1O08790 351 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms