RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 B430218F22RikQ8BQR5 223 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc22a29Q8BWG6 551 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gpr26Q8BZA7 337 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fam126bQ8C729 530 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ptov1Q91VU8 416 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Klhdc8bQ9D2D9 354 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Psg23Q9D2U0 471 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Efcab9Q9DAM2 216 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Psg21Q9DAV5 471 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Klhl1Q9JI74 751 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Btnl10Q9JK39 275 aa9.3□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Zgrf1Q0VGT4 1863 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ighv1-13A0A075B5I0 98 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Hacd4A2AKM2 232 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 TspearJ3S6Y1 670 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1221L7MU53 311 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Bpifa2P07743 235 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 SftpcP21841 193 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dgcr2P98154 548 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Snai1Q02085 264 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Emx2Q04744 253 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Brd9Q3UQU0 596 aaKnown RBP9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Klhdc9Q3USL1 350 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Oog3Q3UWY1 500 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tmem199Q5SYH2 208 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Lcn12Q6JVL5 193 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Polr2mQ6P6I6 366 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Supv3l1Q80YD1 779 aaKnown RBP9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Stx16Q8BVI5 326 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 LaynQ8C351 381 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ppp1r16bQ8VHQ3 568 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Asb16Q8VHS5 453 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Col25a1Q99MQ5 666 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Arhgap8Q9CXP4 425 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mrpl45Q9D0Q7 306 aaKnown RBP9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dcbld1Q9D4J3 503 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Wdr20Q9D5R2 567 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Wdr61Q9ERF3 305 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Hapln2Q9ESM3 341 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Il21rQ9JHX3 529 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Sfrp5Q9WU66 314 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 ReckQ9Z0J1 971 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mbd2Q9Z2E1 414 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mpeg1A1L314 713 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm20715E9Q3L7 95 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm4775F7ANJ3 135 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm6337K7N6X9 211 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm3115L7N285 211 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 C1dO35473 141 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Pim1P06803 397 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ap2a2P17427 938 aaKnown RBP9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 NfyaP23708 346 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tap2P36371 702 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Pxmp2P42925 194 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 GipP48756 144 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 PkiaP63248 76 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 NficP70255 439 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 GaltQ03249 379 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tmprss11cQ1JRP2 431 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 CenptQ3TJM4 515 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mier2Q3U3N0 541 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tbrg1Q3UB74 406 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm10662Q3UT86 313 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Snx33Q4VAA7 574 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Prmt8Q6PAK3 394 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Enpp6Q8BGN3 440 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mon1bQ8BMQ8 553 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mfsd9Q8C0T7 466 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Calhm5Q8R100 309 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Blzf1Q8R2X8 403 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 ClmpQ8R373 373 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tmprss4Q8VCA5 435 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Map3k21Q8VDG6 1002 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ptgr2Q8VDQ1 351 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1387Q8VFA9 311 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Zdhhc21Q9D270 265 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr887Q9EQA6 309 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Rgs20Q9QZB1 239 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm17190V9GX38 357 aa9.29□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Zfp69A2A761 587 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Stox1B2RQL2 990 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cilp2D3Z7H8 1162 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 CatsperdE9Q9F6 805 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 H2-M1F7CXU4 344 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vmn2r3H3BJ88 915 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm2056J3QQ02 144 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc6a2O55192 617 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ntsr1O88319 424 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Stk16O88697 305 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 WapP01173 134 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 NelfeP19426 375 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Hoxd8P23463 289 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 CremP27699 357 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dpp4P28843 760 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ctbp2P56546 445 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 FapP97321 761 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Trappc13Q3TIR1 417 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tsr3Q5HZH2 323 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Atf3Q60765 181 aa9.28□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 MelkQ61846 643 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms