RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Krt83E9Q1Y9 479 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Obox6G3X9U1 347 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mpzl2O70255 215 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Il13P20109 131 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 DbiP31786 87 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cd9P40240 226 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Btbd3P58545 530 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rit1P70426 219 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cd80Q00609 306 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Taar7aQ5QD12 358 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fbxo22Q78JE5 402 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1307Q7TQX1 312 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Carnmt1Q80UY1 400 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 SowahcQ8C0J6 512 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Yod1Q8CB27 343 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tab1Q8CF89 502 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 CenpiQ8K1K4 746 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gin1Q8K259 518 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr651Q8VG78 313 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 EdaraddQ8VHX2 208 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Acer3Q9D099 267 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1366A0A1W2P740 328 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ldlrad1D3YYZ1 218 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r90E9PXJ8 863 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 InhbcP55104 352 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rab8bP61028 207 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ikzf2P81183 526 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Map4k2Q61161 821 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zpbp2Q6X786 326 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfm2Q8BM13 448 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fastkd3Q8BSN9 661 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Leng9Q8BTN6 485 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Lsm14aQ8K2F8 462 aaKnown RBP11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zcchc9Q8R1J3 271 aaKnown RBP11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Eif2b1Q99LC8 305 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Trim2Q9ESN6 744 aaKnown RBP11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Pex11bQ9Z210 259 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm17067E9Q6S4 354 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cx3cl1O35188 395 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Bcl2a1cQ0P538 128 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 PepdQ11136 493 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Defb41Q30KP6 65 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ipcef1Q5DU31 406 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 GcgrQ61606 485 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Grm7Q68ED2 915 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rcbtb1Q6NXM2 531 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Dennd5aQ6PAL8 1287 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ItpkcQ7TS72 678 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 JamlQ80UL9 379 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Galnt7Q80VA0 657 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Lrrtm3Q8BZ81 582 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ccdc187Q8C5V8 958 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Osgin1Q8VC10 478 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1047Q8VGS0 319 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ptbp2Q91Z31 531 aaKnown RBP11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rprd1bQ9CSU0 326 aaKnown RBP11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ing1Q9QXV3 279 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Lcn5A2AJB7 192 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Obox5G3X9P6 291 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 1700017D01RikG5E851 209 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Trav8d-2Q5R1B6 112 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 LpoQ5SW46 710 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 RgmaQ6PCX7 454 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr814Q7TRH4 310 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 CblcQ80XL1 496 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Sacm1lQ9EP69 587 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn1r52Q9EP79 309 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rhox9Q9EQM5 227 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 5830473C10RikF8VQ07 620 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Anxa3O35639 323 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Jmjd7P0C872 316 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Il11ra2P70225 432 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mtf1Q07243 675 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hif3aQ0VBL6 662 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Nell1Q2VWQ2 810 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hectd3Q3U487 861 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ClpbQ60649 677 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Nlgn3Q8BYM5 825 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Q8CF31 99 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kdelr2Q9CQM2 212 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mgme1Q9CXC3 338 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tmem43Q9DBS1 400 aa11.32□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ChadlE9Q7T7 748 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm527Q4KL13 310 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 OclnQ61146 521 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ShbQ6PD21 503 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rsbn1Q80T69 795 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NrrosQ8BMT4 693 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gpr22Q8BZL4 432 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1093Q8VF14 322 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adam33Q923W9 797 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Timm22Q9CQ85 194 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 KelQ9EQF2 713 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rad18Q9QXK2 509 aaKnown RBP11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm29797A0A140LIA7 188 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 A0A286YDP4 300 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fmo6J3QMN6 532 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 E2f3O35261 457 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adrb1P34971 466 aa11.31□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Elk4P41158 430 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms