RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ZNF541Q9H0D2 1346 aa10.03□□□□□ -0.8
PHGDH-225ENST00000641720 TAF1P21675 1872 aa10.02□□□□□ -0.8
PHGDH-225ENST00000641720 MKI67P46013 3256 aaKnown RBP10.02□□□□□ -0.81
PHGDH-225ENST00000641720 H0YIN7 160 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 SRGNP10124 158 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 LBX1P52954 281 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
PHGDH-225ENST00000641720 SULT6B1Q6IMI4 303 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 LDHDQ86WU2 507 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 BRIP1Q9BX63 1249 aa10.02□□□□□ -0.81
PHGDH-225ENST00000641720 AKAP11Q9UKA4 1901 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 CNGB1Q14028 1251 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-225ENST00000641720 C1orf141Q5JVX7 400 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 TAOK3Q9H2K8 898 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 HEG1Q9ULI3 1381 aa10.01□□□□□ -0.81
PHGDH-225ENST00000641720 HTTP42858 3142 aa10□□□□□ -0.81
PHGDH-225ENST00000641720 KLRG2A4D1S0 409 aaPredicted RBP10□□□□□ -0.81
PHGDH-225ENST00000641720 CAMTA2O94983 1202 aa10□□□□□ -0.81
PHGDH-225ENST00000641720 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
PHGDH-225ENST00000641720 PRPF40BQ6NWY9 871 aaKnown RBP10□□□□□ -0.81
PHGDH-225ENST00000641720 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
PHGDH-225ENST00000641720 CEMIPQ8WUJ3 1361 aa10□□□□□ -0.81
PHGDH-225ENST00000641720 BRCA2P51587 3418 aa9.99□□□□□ -0.81
PHGDH-225ENST00000641720 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
PHGDH-225ENST00000641720 STYK1Q6J9G0 422 aa9.99□□□□□ -0.81
PHGDH-225ENST00000641720 MORC1Q86VD1 984 aa9.99□□□□□ -0.81
PHGDH-225ENST00000641720 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
PHGDH-225ENST00000641720 PSME4Q14997 1843 aa9.98□□□□□ -0.81
PHGDH-225ENST00000641720 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
PHGDH-225ENST00000641720 MTHFSDQ2M296 383 aaKnown RBP9.98□□□□□ -0.81
PHGDH-225ENST00000641720 OLFM4Q6UX06 510 aa9.98□□□□□ -0.81
PHGDH-225ENST00000641720 ZNF496Q96IT1 587 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-225ENST00000641720 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-225ENST00000641720 CENPFP49454 3210 aa9.98□□□□□ -0.81
PHGDH-225ENST00000641720 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-225ENST00000641720 FZD9O00144 591 aa9.97□□□□□ -0.81
PHGDH-225ENST00000641720 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
PHGDH-225ENST00000641720 PDE6BP35913 854 aa9.97□□□□□ -0.81
PHGDH-225ENST00000641720 IL6STP40189 918 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-225ENST00000641720 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
PHGDH-225ENST00000641720 SLC51AQ86UW1 340 aa9.97□□□□□ -0.81
PHGDH-225ENST00000641720 ZNF622Q969S3 477 aaKnown RBP eCLIP9.97□□□□□ -0.817e-6■□□□□ 9.9
PHGDH-225ENST00000641720 PCDH10Q9P2E7 1040 aa9.97□□□□□ -0.81
PHGDH-225ENST00000641720 WDR33Q9C0J8 1336 aaKnown RBP9.97□□□□□ -0.81
PHGDH-225ENST00000641720 IQCA1LA6NCM1 817 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 IL17REQ8NFR9 667 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 MASTLQ96GX5 879 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 TBC1D2BQ9UPU7 963 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 RNF123Q5XPI4 1314 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 RIC1Q4ADV7 1423 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 DUOX1Q9NRD9 1551 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 LAMB1P07942 1786 aa9.96□□□□□ -0.82
PHGDH-225ENST00000641720 SCN9AQ15858 1988 aa9.95□□□□□ -0.82
PHGDH-225ENST00000641720 EPHX2P34913 555 aa9.95□□□□□ -0.82
PHGDH-225ENST00000641720 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
PHGDH-225ENST00000641720 MAP1SQ66K74 1059 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-225ENST00000641720 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
PHGDH-225ENST00000641720 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
PHGDH-225ENST00000641720 DDX60Q8IY21 1712 aaKnown RBP9.94□□□□□ -0.82
PHGDH-225ENST00000641720 ABCC12Q96J65 1359 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 A0A087WZG4 1122 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 KCNQ3O43525 872 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 A1BGP04217 495 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 SCNN1DP51172 638 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 DEFB115Q30KQ5 88 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 CCDC93Q567U6 631 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 CST9Q5W186 159 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 CNTROBQ8N137 903 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 CNBD1Q8NA66 436 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 ZNF277Q9NRM2 450 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-225ENST00000641720 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
PHGDH-225ENST00000641720 COL4A1P02462 1669 aa9.93□□□□□ -0.82
PHGDH-225ENST00000641720 HMOX1P09601 288 aa9.93□□□□□ -0.82
PHGDH-225ENST00000641720 PPP2R1AP30153 589 aa9.93□□□□□ -0.82
PHGDH-225ENST00000641720 SOGA3Q5TF21 947 aa9.93□□□□□ -0.82
PHGDH-225ENST00000641720 AIDAQ96BJ3 306 aa9.93□□□□□ -0.82
PHGDH-225ENST00000641720 DDX21Q9NR30 783 aaKnown RBP eCLIP9.93□□□□□ -0.82
PHGDH-225ENST00000641720 PRAMEF22A3QJZ6 481 aa9.92□□□□□ -0.82
PHGDH-225ENST00000641720 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
PHGDH-225ENST00000641720 STARD3NLO95772 234 aa9.92□□□□□ -0.82
PHGDH-225ENST00000641720 IARSP41252 1262 aaKnown RBP9.92□□□□□ -0.82
PHGDH-225ENST00000641720 MLLT1Q03111 559 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-225ENST00000641720 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
PHGDH-225ENST00000641720 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
PHGDH-225ENST00000641720 PRKRIP1Q9H875 184 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-225ENST00000641720 RBBP6Q7Z6E9 1792 aaKnown RBP9.92□□□□□ -0.82
PHGDH-225ENST00000641720 RGL2O15211 777 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 NPR1P16066 1061 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 MAP2K1Q02750 393 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-225ENST00000641720 CRY2Q49AN0 593 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 EAPPQ56P03 285 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-225ENST00000641720 CYP4F22Q6NT55 531 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 GPC2Q8N158 579 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 CAPNS2Q96L46 248 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 SETDB2Q96T68 719 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 PSMD1Q99460 953 aa9.91□□□□□ -0.82
PHGDH-225ENST00000641720 USP16Q9Y5T5 823 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms