RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-221ENST00000641573 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-221ENST00000641573 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-221ENST00000641573 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
PHGDH-221ENST00000641573 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
PHGDH-221ENST00000641573 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
PHGDH-221ENST00000641573 F6X3S4 739 aa16.55■□□□□ 0.24
PHGDH-221ENST00000641573 KIF3CO14782 793 aa16.55■□□□□ 0.24
PHGDH-221ENST00000641573 PIGBQ92521 554 aa16.55■□□□□ 0.24
PHGDH-221ENST00000641573 C5P01031 1676 aa16.55■□□□□ 0.24
PHGDH-221ENST00000641573 ANXA1P04083 346 aa16.54■□□□□ 0.24
PHGDH-221ENST00000641573 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
PHGDH-221ENST00000641573 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
PHGDH-221ENST00000641573 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 IGHDP01880 384 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
PHGDH-221ENST00000641573 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
PHGDH-221ENST00000641573 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
PHGDH-221ENST00000641573 UBR2Q8IWV8 1755 aa16.52■□□□□ 0.24
PHGDH-221ENST00000641573 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
PHGDH-221ENST00000641573 ITGB4P16144 1822 aa16.52■□□□□ 0.23
PHGDH-221ENST00000641573 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
PHGDH-221ENST00000641573 TOMM70O94826 608 aa16.51■□□□□ 0.23
PHGDH-221ENST00000641573 PDIA6Q15084 440 aa16.51■□□□□ 0.23
PHGDH-221ENST00000641573 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-221ENST00000641573 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
PHGDH-221ENST00000641573 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
PHGDH-221ENST00000641573 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
PHGDH-221ENST00000641573 CAPN15O75808 1086 aa16.49■□□□□ 0.23
PHGDH-221ENST00000641573 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
PHGDH-221ENST00000641573 AK7Q96M32 723 aa16.49■□□□□ 0.23
PHGDH-221ENST00000641573 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
PHGDH-221ENST00000641573 MYL6BP14649 208 aa16.48■□□□□ 0.23
PHGDH-221ENST00000641573 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
PHGDH-221ENST00000641573 DNAAF4Q8WXU2 420 aa16.48■□□□□ 0.23
PHGDH-221ENST00000641573 C1orf115Q9H7X2 142 aa16.48■□□□□ 0.23
PHGDH-221ENST00000641573 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
PHGDH-221ENST00000641573 DDX58O95786 925 aaKnown RBP16.47■□□□□ 0.23
PHGDH-221ENST00000641573 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-221ENST00000641573 KSR2Q6VAB6 950 aa16.47■□□□□ 0.23
PHGDH-221ENST00000641573 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
PHGDH-221ENST00000641573 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
PHGDH-221ENST00000641573 PHF14O94880 888 aa16.46■□□□□ 0.23
PHGDH-221ENST00000641573 AIMP1Q12904 312 aaKnown RBP16.46■□□□□ 0.23
PHGDH-221ENST00000641573 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
PHGDH-221ENST00000641573 XAGE3Q8WTP9 111 aa16.46■□□□□ 0.23
PHGDH-221ENST00000641573 MEIS3Q99687 375 aa16.46■□□□□ 0.23
PHGDH-221ENST00000641573 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
PHGDH-221ENST00000641573 TEX13AQ9BXU3 409 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-221ENST00000641573 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-221ENST00000641573 COPS6Q7L5N1 327 aa16.45■□□□□ 0.22
PHGDH-221ENST00000641573 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
PHGDH-221ENST00000641573 SRCIN1Q9C0H9 1055 aa16.45■□□□□ 0.22
PHGDH-221ENST00000641573 MAP3K2Q9Y2U5 619 aa16.45■□□□□ 0.22
PHGDH-221ENST00000641573 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-221ENST00000641573 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-221ENST00000641573 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
PHGDH-221ENST00000641573 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-221ENST00000641573 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
PHGDH-221ENST00000641573 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-221ENST00000641573 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
PHGDH-221ENST00000641573 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
PHGDH-221ENST00000641573 A1BGP04217 495 aa16.43■□□□□ 0.22
PHGDH-221ENST00000641573 GNAI3P08754 354 aa16.43■□□□□ 0.22
PHGDH-221ENST00000641573 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
PHGDH-221ENST00000641573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
PHGDH-221ENST00000641573 STARD3NLO95772 234 aa16.42■□□□□ 0.22
PHGDH-221ENST00000641573 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
PHGDH-221ENST00000641573 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-221ENST00000641573 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
PHGDH-221ENST00000641573 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
PHGDH-221ENST00000641573 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 GNAI2P04899 355 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-221ENST00000641573 ANKRD44Q8N8A2 993 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
PHGDH-221ENST00000641573 USP44Q9H0E7 712 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
PHGDH-221ENST00000641573 SSFA2P28290 1259 aa16.4■□□□□ 0.22
PHGDH-221ENST00000641573 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
PHGDH-221ENST00000641573 BCS1LQ9Y276 419 aa16.4■□□□□ 0.22
PHGDH-221ENST00000641573 PRELPP51888 382 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 SMC5Q8IY18 1101 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 LINS1Q8NG48 757 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-221ENST00000641573 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
PHGDH-221ENST00000641573 UBR3Q6ZT12 1888 aa16.38■□□□□ 0.21
PHGDH-221ENST00000641573 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms