RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 USP46P62068 366 aa14.72□□□□□ -0.05
CASC19-229ENST00000641418 SKIV2LQ15477 1246 aaKnown RBP14.72□□□□□ -0.05
CASC19-229ENST00000641418 PTF1AQ7RTS3 328 aa14.72□□□□□ -0.05
CASC19-229ENST00000641418 PCMTD1Q96MG8 357 aaPredicted RBP14.72□□□□□ -0.05
CASC19-229ENST00000641418 COL18A1P39060 1754 aa14.71□□□□□ -0.05
CASC19-229ENST00000641418 A0A1W2PP64 1363 aa14.71□□□□□ -0.05
CASC19-229ENST00000641418 PARP4Q9UKK3 1724 aaKnown RBP14.71□□□□□ -0.05
CASC19-229ENST00000641418 KDM4AO75164 1064 aa14.71□□□□□ -0.06
CASC19-229ENST00000641418 PRR14Q9BWN1 585 aa14.71□□□□□ -0.06
CASC19-229ENST00000641418 PPP4CP60510 307 aa14.7□□□□□ -0.06
CASC19-229ENST00000641418 KMT5BQ4FZB7 885 aa14.7□□□□□ -0.06
CASC19-229ENST00000641418 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
CASC19-229ENST00000641418 SPIRE2Q8WWL2 714 aa14.7□□□□□ -0.06
CASC19-229ENST00000641418 NINLQ9Y2I6 1382 aa14.69□□□□□ -0.06
CASC19-229ENST00000641418 ABCC6O95255 1503 aa14.69□□□□□ -0.06
CASC19-229ENST00000641418 IL2RBP14784 551 aa14.69□□□□□ -0.06
CASC19-229ENST00000641418 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
CASC19-229ENST00000641418 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
CASC19-229ENST00000641418 IP6K1Q92551 441 aa14.68□□□□□ -0.06
CASC19-229ENST00000641418 COG3Q96JB2 828 aa14.68□□□□□ -0.06
CASC19-229ENST00000641418 TSR3Q9UJK0 312 aaKnown RBP14.68□□□□□ -0.06
CASC19-229ENST00000641418 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
CASC19-229ENST00000641418 KCNQ2O43526 872 aa14.67□□□□□ -0.06
CASC19-229ENST00000641418 CFHP08603 1231 aa14.67□□□□□ -0.06
CASC19-229ENST00000641418 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
CASC19-229ENST00000641418 SPON1Q9HCB6 807 aa14.67□□□□□ -0.06
CASC19-229ENST00000641418 LRRC37A3O60309 1634 aa14.67□□□□□ -0.06
CASC19-229ENST00000641418 TMF1P82094 1093 aa14.66□□□□□ -0.06
CASC19-229ENST00000641418 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
CASC19-229ENST00000641418 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
CASC19-229ENST00000641418 TNS2Q63HR2 1409 aa14.65□□□□□ -0.06
CASC19-229ENST00000641418 GJA5P36382 358 aa14.65□□□□□ -0.06
CASC19-229ENST00000641418 HPS5Q9UPZ3 1129 aa14.65□□□□□ -0.06
CASC19-229ENST00000641418 LTV1Q96GA3 475 aaPredicted RBP14.64□□□□□ -0.07
CASC19-229ENST00000641418 ACSBG1Q96GR2 724 aa14.64□□□□□ -0.07
CASC19-229ENST00000641418 PPP1R1BQ9UD71 204 aaPredicted RBP14.64□□□□□ -0.07
CASC19-229ENST00000641418 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
CASC19-229ENST00000641418 AMPHP49418 695 aa14.63□□□□□ -0.07
CASC19-229ENST00000641418 BCAMP50895 628 aa14.63□□□□□ -0.07
CASC19-229ENST00000641418 ANKRD36BQ8N2N9 1353 aa14.63□□□□□ -0.07
CASC19-229ENST00000641418 RREB1Q92766 1687 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 MAP3K19Q56UN5 1328 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 HOXC9P31274 260 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 CLK2P49760 499 aaKnown RBP14.62□□□□□ -0.07
CASC19-229ENST00000641418 CDCA8Q53HL2 280 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 RIC3Q7Z5B4 369 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 POLR3EQ9NVU0 708 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 STK32BQ9NY57 414 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 USP47Q96K76 1375 aa14.62□□□□□ -0.07
CASC19-229ENST00000641418 FYB1O15117 783 aa14.61□□□□□ -0.07
CASC19-229ENST00000641418 FBLN1P23142 703 aa14.61□□□□□ -0.07
CASC19-229ENST00000641418 KCTD12Q96CX2 325 aaKnown RBP14.61□□□□□ -0.07
CASC19-229ENST00000641418 TIMELESSQ9UNS1 1208 aa14.61□□□□□ -0.07
CASC19-229ENST00000641418 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
CASC19-229ENST00000641418 SLC15A2Q16348 729 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 THSD4Q6ZMP0 1018 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
CASC19-229ENST00000641418 USP54Q70EL1 1684 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 SPTLC1O15269 473 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
CASC19-229ENST00000641418 ATP6V1AP38606 617 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 TUSC1Q2TAM9 212 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 PDGFDQ9GZP0 370 aaPredicted RBP14.6□□□□□ -0.07
CASC19-229ENST00000641418 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
CASC19-229ENST00000641418 HOXA2O43364 376 aa14.59□□□□□ -0.07
CASC19-229ENST00000641418 NYAP1Q6ZVC0 841 aa14.59□□□□□ -0.07
CASC19-229ENST00000641418 MOXD2PA6NHM9 499 aa14.58□□□□□ -0.08
CASC19-229ENST00000641418 ZBTB7AO95365 584 aa14.58□□□□□ -0.08
CASC19-229ENST00000641418 RRS1Q15050 365 aaKnown RBP14.58□□□□□ -0.08
CASC19-229ENST00000641418 RSBN1LQ6PCB5 846 aaPredicted RBP14.58□□□□□ -0.08
CASC19-229ENST00000641418 FUT2Q10981 343 aa14.57□□□□□ -0.08
CASC19-229ENST00000641418 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
CASC19-229ENST00000641418 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
CASC19-229ENST00000641418 RGPD3A6NKT7 1758 aaPredicted RBP14.55□□□□□ -0.08
CASC19-229ENST00000641418 RGPD4Q7Z3J3 1758 aa14.55□□□□□ -0.08
CASC19-229ENST00000641418 NBPF6Q5VWK0 638 aa14.55□□□□□ -0.08
CASC19-229ENST00000641418 NBPF4Q96M43 638 aa14.55□□□□□ -0.08
CASC19-229ENST00000641418 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
CASC19-229ENST00000641418 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 WNK3Q9BYP7 1800 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 FDX1P10109 184 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 NDUFV2P19404 249 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 PROCA1Q8NCQ7 364 aaPredicted RBP14.54□□□□□ -0.08
CASC19-229ENST00000641418 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.54□□□□□ -0.08
CASC19-229ENST00000641418 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 MTFR1LQ9H019 292 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 WBP1LQ9NX94 342 aa14.54□□□□□ -0.08
CASC19-229ENST00000641418 SBF2Q86WG5 1849 aa14.53□□□□□ -0.08
CASC19-229ENST00000641418 SLC27A3Q5K4L6 730 aa14.53□□□□□ -0.08
CASC19-229ENST00000641418 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
CASC19-229ENST00000641418 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
CASC19-229ENST00000641418 CARD14Q9BXL6 1004 aa14.53□□□□□ -0.08
CASC19-229ENST00000641418 CGNL1Q0VF96 1302 aa14.53□□□□□ -0.08
CASC19-229ENST00000641418 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.08
CASC19-229ENST00000641418 RAPGEF4Q8WZA2 1011 aa14.52□□□□□ -0.08
CASC19-229ENST00000641418 LIMD1Q9UGP4 676 aa14.52□□□□□ -0.08
CASC19-229ENST00000641418 ZNF827Q17R98 1081 aa14.51□□□□□ -0.09
CASC19-229ENST00000641418 PRPF38BQ5VTL8 546 aaKnown RBP14.51□□□□□ -0.09
CASC19-229ENST00000641418 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms