RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 MYD88Q99836 296 aa22.15■■□□□ 1.14
PHGDH-214ENST00000641314 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.13
PHGDH-214ENST00000641314 NPM2Q86SE8 214 aaKnown RBP22.14■■□□□ 1.13
PHGDH-214ENST00000641314 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
PHGDH-214ENST00000641314 ZBTB3Q9H5J0 574 aa22.14■■□□□ 1.13
PHGDH-214ENST00000641314 RREB1Q92766 1687 aa22.13■■□□□ 1.13
PHGDH-214ENST00000641314 NUP188Q5SRE5 1749 aa22.13■■□□□ 1.13
PHGDH-214ENST00000641314 IL6STP40189 918 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-214ENST00000641314 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
PHGDH-214ENST00000641314 ALDH1L1O75891 902 aa22.12■■□□□ 1.13
PHGDH-214ENST00000641314 CWF19L2Q2TBE0 894 aaKnown RBP22.12■■□□□ 1.13
PHGDH-214ENST00000641314 LINS1Q8NG48 757 aa22.12■■□□□ 1.13
PHGDH-214ENST00000641314 MYH14Q7Z406 1995 aaKnown RBP22.12■■□□□ 1.13
PHGDH-214ENST00000641314 GNAI3P08754 354 aa22.12■■□□□ 1.13
PHGDH-214ENST00000641314 IGHDP01880 384 aa22.11■■□□□ 1.13
PHGDH-214ENST00000641314 USP44Q9H0E7 712 aa22.11■■□□□ 1.13
PHGDH-214ENST00000641314 IGKV5-2P06315 115 aa22.1■■□□□ 1.13
PHGDH-214ENST00000641314 CENPQQ7L2Z9 268 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-214ENST00000641314 RWDD1Q9H446 243 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-214ENST00000641314 KDM2BQ8NHM5 1336 aa22.09■■□□□ 1.13
PHGDH-214ENST00000641314 AFDNP55196 1824 aaKnown RBP22.09■■□□□ 1.13
PHGDH-214ENST00000641314 TAF1LQ8IZX4 1826 aa22.09■■□□□ 1.13
PHGDH-214ENST00000641314 MAP3K15Q6ZN16 1313 aa22.08■■□□□ 1.13
PHGDH-214ENST00000641314 CNTNAP4Q9C0A0 1308 aa22.08■■□□□ 1.13
PHGDH-214ENST00000641314 NEURL1BA8MQ27 555 aa22.08■■□□□ 1.13
PHGDH-214ENST00000641314 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
PHGDH-214ENST00000641314 GNAI2P04899 355 aa22.08■■□□□ 1.13
PHGDH-214ENST00000641314 UBTFL1P0CB47 393 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-214ENST00000641314 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.13
PHGDH-214ENST00000641314 DZIP3Q86Y13 1208 aaKnown RBP22.08■■□□□ 1.13
PHGDH-214ENST00000641314 C9orf78Q9NZ63 289 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-214ENST00000641314 TBC1D2BQ9UPU7 963 aa22.08■■□□□ 1.12
PHGDH-214ENST00000641314 EP400Q96L91 3159 aa22.07■■□□□ 1.12
PHGDH-214ENST00000641314 NBPF7P0C2Y1 421 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-214ENST00000641314 LRRFIP2Q9Y608 721 aaKnown RBP22.06■■□□□ 1.12
PHGDH-214ENST00000641314 COL15A1P39059 1388 aa22.05■■□□□ 1.12
PHGDH-214ENST00000641314 APBA3O96018 575 aa22.05■■□□□ 1.12
PHGDH-214ENST00000641314 HDAC1Q13547 482 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-214ENST00000641314 GCKRQ14397 625 aa22.05■■□□□ 1.12
PHGDH-214ENST00000641314 RC3H1Q5TC82 1133 aaKnown RBP22.05■■□□□ 1.12
PHGDH-214ENST00000641314 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
PHGDH-214ENST00000641314 GRM8O00222 908 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 CEP85Q6P2H3 762 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 C4BP0C0L5 1744 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 HLFQ16534 295 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 SLC27A3Q5K4L6 730 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
PHGDH-214ENST00000641314 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
PHGDH-214ENST00000641314 GNPATO15228 680 aa22.03■■□□□ 1.12
PHGDH-214ENST00000641314 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
PHGDH-214ENST00000641314 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
PHGDH-214ENST00000641314 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-214ENST00000641314 ERVV-1B6SEH8 477 aa22.02■■□□□ 1.12
PHGDH-214ENST00000641314 TXNRD1Q16881 649 aa22.02■■□□□ 1.12
PHGDH-214ENST00000641314 A0A087WZG4 1122 aa22.01■■□□□ 1.11
PHGDH-214ENST00000641314 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
PHGDH-214ENST00000641314 AK7Q96M32 723 aa22.01■■□□□ 1.11
PHGDH-214ENST00000641314 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-214ENST00000641314 NUP98P52948 1817 aa22.01■■□□□ 1.11
PHGDH-214ENST00000641314 ANKRD36CQ5JPF3 1778 aa22■■□□□ 1.11
PHGDH-214ENST00000641314 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
PHGDH-214ENST00000641314 SMIM5Q71RC9 77 aa22■■□□□ 1.11
PHGDH-214ENST00000641314 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
PHGDH-214ENST00000641314 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
PHGDH-214ENST00000641314 UTYO14607 1347 aa22■■□□□ 1.11
PHGDH-214ENST00000641314 CAMTA2O94983 1202 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 CCDC191Q8NCU4 936 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-214ENST00000641314 HDAC5Q9UQL6 1122 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
PHGDH-214ENST00000641314 PLSCR1O15162 318 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 GPTP24298 496 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 UBE3BQ7Z3V4 1068 aa21.99■■□□□ 1.11
PHGDH-214ENST00000641314 PROM2Q8N271 834 aa21.98■■□□□ 1.11
PHGDH-214ENST00000641314 SUCLG2Q96I99 432 aa21.98■■□□□ 1.11
PHGDH-214ENST00000641314 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
PHGDH-214ENST00000641314 HMMRO75330 724 aa21.97■■□□□ 1.11
PHGDH-214ENST00000641314 PHF14O94880 888 aa21.96■■□□□ 1.11
PHGDH-214ENST00000641314 ATP8B2P98198 1209 aa21.96■■□□□ 1.11
PHGDH-214ENST00000641314 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
PHGDH-214ENST00000641314 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
PHGDH-214ENST00000641314 PNMA6EA0A0J9YXQ4 647 aa21.95■■□□□ 1.11
PHGDH-214ENST00000641314 TRIM28Q13263 835 aaKnown RBP21.95■■□□□ 1.11
PHGDH-214ENST00000641314 SKAP1Q86WV1 359 aa21.95■■□□□ 1.11
PHGDH-214ENST00000641314 ZNF652Q9Y2D9 606 aa21.95■■□□□ 1.1
PHGDH-214ENST00000641314 SCN7AQ01118 1682 aa21.94■■□□□ 1.1
PHGDH-214ENST00000641314 H7C1W4 665 aa21.94■■□□□ 1.1
PHGDH-214ENST00000641314 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
PHGDH-214ENST00000641314 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
PHGDH-214ENST00000641314 SMC5Q8IY18 1101 aa21.94■■□□□ 1.1
PHGDH-214ENST00000641314 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
PHGDH-214ENST00000641314 HMGB2P26583 209 aaKnown RBP21.93■■□□□ 1.1
PHGDH-214ENST00000641314 CASP7P55210 303 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 ZNF34Q8IZ26 560 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
PHGDH-214ENST00000641314 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
PHGDH-214ENST00000641314 GCC1Q96CN9 775 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 KAZALD1Q96I82 304 aa21.93■■□□□ 1.1
PHGDH-214ENST00000641314 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms