RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 HSP90AB4PQ58FF6 505 aa16.36■□□□□ 0.21
LINC02228-202ENST00000641261 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
LINC02228-202ENST00000641261 MYD88Q99836 296 aa16.36■□□□□ 0.21
LINC02228-202ENST00000641261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
LINC02228-202ENST00000641261 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
LINC02228-202ENST00000641261 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
LINC02228-202ENST00000641261 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
LINC02228-202ENST00000641261 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
LINC02228-202ENST00000641261 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
LINC02228-202ENST00000641261 STRN4Q9NRL3 753 aa16.35■□□□□ 0.21
LINC02228-202ENST00000641261 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
LINC02228-202ENST00000641261 GCKRQ14397 625 aa16.34■□□□□ 0.21
LINC02228-202ENST00000641261 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
LINC02228-202ENST00000641261 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
LINC02228-202ENST00000641261 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
LINC02228-202ENST00000641261 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
LINC02228-202ENST00000641261 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
LINC02228-202ENST00000641261 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
LINC02228-202ENST00000641261 EPHA10Q5JZY3 1008 aa16.33■□□□□ 0.2
LINC02228-202ENST00000641261 CLASRPQ8N2M8 674 aaKnown RBP16.33■□□□□ 0.2
LINC02228-202ENST00000641261 KLHDC4Q8TBB5 520 aa16.33■□□□□ 0.2
LINC02228-202ENST00000641261 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
LINC02228-202ENST00000641261 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
LINC02228-202ENST00000641261 ST18O60284 1047 aa16.32■□□□□ 0.2
LINC02228-202ENST00000641261 IL2RBP14784 551 aa16.32■□□□□ 0.2
LINC02228-202ENST00000641261 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
LINC02228-202ENST00000641261 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
LINC02228-202ENST00000641261 KCPQ6ZWJ8 1503 aa16.31■□□□□ 0.2
LINC02228-202ENST00000641261 SASH1O94885 1247 aa16.31■□□□□ 0.2
LINC02228-202ENST00000641261 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
LINC02228-202ENST00000641261 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
LINC02228-202ENST00000641261 SIL1Q9H173 461 aa16.31■□□□□ 0.2
LINC02228-202ENST00000641261 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
LINC02228-202ENST00000641261 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
LINC02228-202ENST00000641261 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
LINC02228-202ENST00000641261 SSFA2P28290 1259 aa16.29■□□□□ 0.2
LINC02228-202ENST00000641261 NEK4P51957 841 aa16.29■□□□□ 0.2
LINC02228-202ENST00000641261 AACSQ86V21 672 aa16.29■□□□□ 0.2
LINC02228-202ENST00000641261 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
LINC02228-202ENST00000641261 GLRX3O76003 335 aaKnown RBP16.29■□□□□ 0.2
LINC02228-202ENST00000641261 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
LINC02228-202ENST00000641261 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
LINC02228-202ENST00000641261 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
LINC02228-202ENST00000641261 UBE3BQ7Z3V4 1068 aa16.28■□□□□ 0.2
LINC02228-202ENST00000641261 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
LINC02228-202ENST00000641261 ECHDC1Q9NTX5 307 aa16.28■□□□□ 0.2
LINC02228-202ENST00000641261 TLR7Q9NYK1 1049 aaKnown RBP16.28■□□□□ 0.2
LINC02228-202ENST00000641261 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
LINC02228-202ENST00000641261 SGSM2O43147 1006 aa16.28■□□□□ 0.2
LINC02228-202ENST00000641261 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
LINC02228-202ENST00000641261 MCCP23508 829 aa16.27■□□□□ 0.2
LINC02228-202ENST00000641261 EVA1CP58658 441 aa16.27■□□□□ 0.2
LINC02228-202ENST00000641261 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC02228-202ENST00000641261 PKP1Q13835 747 aa16.27■□□□□ 0.2
LINC02228-202ENST00000641261 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
LINC02228-202ENST00000641261 TRAK2O60296 914 aa16.27■□□□□ 0.19
LINC02228-202ENST00000641261 CCDC8Q9H0W5 538 aaPredicted RBP16.27■□□□□ 0.19
LINC02228-202ENST00000641261 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.19
LINC02228-202ENST00000641261 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 A1BGP04217 495 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 ANAPC15P60006 121 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
LINC02228-202ENST00000641261 RAD50Q92878 1312 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 TJP1Q07157 1748 aa16.26■□□□□ 0.19
LINC02228-202ENST00000641261 A0A087WZG4 1122 aa16.25■□□□□ 0.19
LINC02228-202ENST00000641261 HSPA4P34932 840 aa16.25■□□□□ 0.19
LINC02228-202ENST00000641261 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
LINC02228-202ENST00000641261 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
LINC02228-202ENST00000641261 GBP4Q96PP9 640 aa16.25■□□□□ 0.19
LINC02228-202ENST00000641261 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
LINC02228-202ENST00000641261 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
LINC02228-202ENST00000641261 CASP7P55210 303 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 IL17RAQ96F46 866 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 NOL8Q76FK4 1167 aaKnown RBP16.24■□□□□ 0.19
LINC02228-202ENST00000641261 BTG4Q9NY30 223 aa16.24■□□□□ 0.19
LINC02228-202ENST00000641261 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
LINC02228-202ENST00000641261 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
LINC02228-202ENST00000641261 ITGB4P16144 1822 aa16.23■□□□□ 0.19
LINC02228-202ENST00000641261 CYP2E1P05181 493 aaPredicted RBP16.23■□□□□ 0.19
LINC02228-202ENST00000641261 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
LINC02228-202ENST00000641261 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 COL15A1P39059 1388 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
LINC02228-202ENST00000641261 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
LINC02228-202ENST00000641261 CLEC17AQ6ZS10 378 aa16.21■□□□□ 0.18
LINC02228-202ENST00000641261 EVI5LQ96CN4 794 aa16.21■□□□□ 0.18
LINC02228-202ENST00000641261 BOLA2Q9H3K6 86 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms