RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TMX3Q96JJ7 454 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 NFATC2IPQ8NCF5 419 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 CDK5RAP3Q96JB5 506 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 MYO5CQ9NQX4 1742 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 NEO1Q92859 1461 aa20.63■□□□□ 0.89
SCARB2-223ENST00000640640 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
SCARB2-223ENST00000640640 STX6O43752 255 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 SLC5A1P13866 664 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 CAMK4Q16566 473 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 ZPR1O75312 459 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 SAMD9LQ8IVG5 1584 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 CCDC183Q5T5S1 534 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
SCARB2-223ENST00000640640 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
SCARB2-223ENST00000640640 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
SCARB2-223ENST00000640640 LMBR1LQ6UX01 489 aa20.61■□□□□ 0.89
SCARB2-223ENST00000640640 CHL1O00533 1208 aa20.61■□□□□ 0.89
SCARB2-223ENST00000640640 GUCY1B3Q02153 619 aa20.61■□□□□ 0.89
SCARB2-223ENST00000640640 GJB2P29033 226 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 ANAPC15P60006 121 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 G2E3Q7L622 706 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 SNX21Q969T3 373 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 PHAXQ9H814 394 aaKnown RBP20.6■□□□□ 0.89
SCARB2-223ENST00000640640 PA2G4Q9UQ80 394 aaKnown RBP20.6■□□□□ 0.89
SCARB2-223ENST00000640640 OFD1O75665 1012 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 HMG20BQ9P0W2 317 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 CCT2P78371 535 aaKnown RBP20.6■□□□□ 0.89
SCARB2-223ENST00000640640 SOGA3Q5TF21 947 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 ARGLU1Q9NWB6 273 aaPredicted RBP20.6■□□□□ 0.89
SCARB2-223ENST00000640640 DACH1Q9UI36 760 aa20.6■□□□□ 0.89
SCARB2-223ENST00000640640 CWF19L2Q2TBE0 894 aaKnown RBP20.6■□□□□ 0.89
SCARB2-223ENST00000640640 SBNO1A3KN83 1393 aa20.59■□□□□ 0.89
SCARB2-223ENST00000640640 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
SCARB2-223ENST00000640640 NAP1L1P55209 391 aaKnown RBP20.59■□□□□ 0.89
SCARB2-223ENST00000640640 FILIP1Q7Z7B0 1213 aa20.59■□□□□ 0.89
SCARB2-223ENST00000640640 MAGI2Q86UL8 1455 aa20.59■□□□□ 0.89
SCARB2-223ENST00000640640 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.89
SCARB2-223ENST00000640640 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
SCARB2-223ENST00000640640 SOS1Q07889 1333 aaPredicted RBP20.58■□□□□ 0.89
SCARB2-223ENST00000640640 CCDC196A0A1B0GTZ2 297 aa20.58■□□□□ 0.89
SCARB2-223ENST00000640640 EPS15P42566 896 aa20.58■□□□□ 0.88
SCARB2-223ENST00000640640 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.88
SCARB2-223ENST00000640640 TFIP11Q9UBB9 837 aaKnown RBP20.58■□□□□ 0.88
SCARB2-223ENST00000640640 KLHL40Q2TBA0 621 aa20.58■□□□□ 0.88
SCARB2-223ENST00000640640 MAGEC2Q9UBF1 373 aaPredicted RBP20.57■□□□□ 0.88
SCARB2-223ENST00000640640 CCDC82Q8N4S0 544 aa20.57■□□□□ 0.88
SCARB2-223ENST00000640640 GOLGA8BA8MQT2 603 aa20.57■□□□□ 0.88
SCARB2-223ENST00000640640 SMARCE1Q969G3 411 aa20.57■□□□□ 0.88
SCARB2-223ENST00000640640 DHX8Q14562 1220 aaKnown RBP20.57■□□□□ 0.88
SCARB2-223ENST00000640640 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
SCARB2-223ENST00000640640 HAND2P61296 217 aa20.56■□□□□ 0.88
SCARB2-223ENST00000640640 RNMTO43148 476 aaKnown RBP20.56■□□□□ 0.88
SCARB2-223ENST00000640640 CCP110O43303 1012 aa20.56■□□□□ 0.88
SCARB2-223ENST00000640640 TTF1Q15361 905 aaPredicted RBP20.56■□□□□ 0.88
SCARB2-223ENST00000640640 RBM8AQ9Y5S9 174 aaKnown RBP20.56■□□□□ 0.88
SCARB2-223ENST00000640640 PLEKHG3A1L390 1219 aa20.55■□□□□ 0.88
SCARB2-223ENST00000640640 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
SCARB2-223ENST00000640640 CCAR1Q8IX12 1150 aaKnown RBP20.55■□□□□ 0.88
SCARB2-223ENST00000640640 TCEANC2Q96MN5 208 aa20.55■□□□□ 0.88
SCARB2-223ENST00000640640 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
SCARB2-223ENST00000640640 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
SCARB2-223ENST00000640640 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 SLC12A7Q9Y666 1083 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 RBM5P52756 815 aaKnown RBP eCLIP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 STIM1Q13586 685 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 MTERF4Q7Z6M4 381 aaKnown RBP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 TTC41PQ6P2S7 1318 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 KDM5CP41229 1560 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 IL15P40933 162 aaPredicted RBP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 USP5P45974 858 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 BRF1Q92994 677 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 ORAI2Q96SN7 254 aa20.54■□□□□ 0.88
SCARB2-223ENST00000640640 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
SCARB2-223ENST00000640640 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
SCARB2-223ENST00000640640 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
SCARB2-223ENST00000640640 MAP7D2Q96T17 732 aa20.53■□□□□ 0.88
SCARB2-223ENST00000640640 BABAM1Q9NWV8 329 aa20.53■□□□□ 0.88
SCARB2-223ENST00000640640 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
SCARB2-223ENST00000640640 PPFIBP1Q86W92 1011 aa20.53■□□□□ 0.88
SCARB2-223ENST00000640640 DZIP1Q86YF9 867 aaKnown RBP20.53■□□□□ 0.88
SCARB2-223ENST00000640640 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
SCARB2-223ENST00000640640 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 CKAP2LQ8IYA6 745 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 MKNK2Q9HBH9 465 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 CEP131Q9UPN4 1083 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 CBFA2T2O43439 604 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 IL2RBP14784 551 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 SMTNL1A8MU46 457 aa20.52■□□□□ 0.88
SCARB2-223ENST00000640640 CTCFLQ8NI51 663 aaPredicted RBP20.52■□□□□ 0.88
SCARB2-223ENST00000640640 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
SCARB2-223ENST00000640640 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 LTKP29376 864 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms