RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 TJP1Q07157 1748 aa11.1□□□□□ -0.63
HLA-B-258ENST00000640615 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
HLA-B-258ENST00000640615 MVPQ14764 893 aaKnown RBP11.1□□□□□ -0.63
HLA-B-258ENST00000640615 RC3H1Q5TC82 1133 aaKnown RBP11.1□□□□□ -0.63
HLA-B-258ENST00000640615 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
HLA-B-258ENST00000640615 KIF6Q6ZMV9 814 aa11.1□□□□□ -0.63
HLA-B-258ENST00000640615 PROM2Q8N271 834 aa11.1□□□□□ -0.63
HLA-B-258ENST00000640615 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
HLA-B-258ENST00000640615 ADCY9O60503 1353 aa11.09□□□□□ -0.63
HLA-B-258ENST00000640615 GNPATO15228 680 aa11.09□□□□□ -0.63
HLA-B-258ENST00000640615 HMGB2P26583 209 aaKnown RBP11.09□□□□□ -0.63
HLA-B-258ENST00000640615 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
HLA-B-258ENST00000640615 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
HLA-B-258ENST00000640615 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
HLA-B-258ENST00000640615 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
HLA-B-258ENST00000640615 RPS6KA4O75676 772 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 NEXNQ0ZGT2 675 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 DZIP3Q86Y13 1208 aaKnown RBP11.08□□□□□ -0.64
HLA-B-258ENST00000640615 AK7Q96M32 723 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 MYD88Q99836 296 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
HLA-B-258ENST00000640615 RTCBQ9Y3I0 505 aaKnown RBP11.08□□□□□ -0.64
HLA-B-258ENST00000640615 A0A087WZG4 1122 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 BEND3Q5T5X7 828 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 SMIM5Q71RC9 77 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 METTL22Q9BUU2 404 aaPredicted RBP11.07□□□□□ -0.64
HLA-B-258ENST00000640615 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
HLA-B-258ENST00000640615 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
HLA-B-258ENST00000640615 ZNF831Q5JPB2 1677 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 MAP3K15Q6ZN16 1313 aa11.07□□□□□ -0.64
HLA-B-258ENST00000640615 LY75O60449 1722 aa11.06□□□□□ -0.64
HLA-B-258ENST00000640615 ZBTB7BO15156 539 aaPredicted RBP11.06□□□□□ -0.64
HLA-B-258ENST00000640615 PHF14O94880 888 aa11.06□□□□□ -0.64
HLA-B-258ENST00000640615 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
HLA-B-258ENST00000640615 COL15A1P39059 1388 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 ALDH1L1O75891 902 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 HLFQ16534 295 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
HLA-B-258ENST00000640615 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
HLA-B-258ENST00000640615 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 CAMTA2O94983 1202 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 RFC4P35249 363 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 TCIRG1Q13488 830 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 AAMPQ13685 434 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 AMIGO3Q86WK7 504 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
HLA-B-258ENST00000640615 MEIS3Q99687 375 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 TFCP2L1Q9NZI6 479 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
HLA-B-258ENST00000640615 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-258ENST00000640615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
HLA-B-258ENST00000640615 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 ZPR1O75312 459 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 GNAI3P08754 354 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 ADRA2BP18089 450 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 PTGER2P43116 358 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
HLA-B-258ENST00000640615 USP44Q9H0E7 712 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
HLA-B-258ENST00000640615 C4BP0C0L5 1744 aa11.03□□□□□ -0.64
HLA-B-258ENST00000640615 COL24A1Q17RW2 1714 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 UBTFL1P0CB47 393 aaPredicted RBP11.02□□□□□ -0.65
HLA-B-258ENST00000640615 GPTP24298 496 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 SSFA2P28290 1259 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 GCKRQ14397 625 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 USPL1Q5W0Q7 1092 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 ISCA1Q9BUE6 129 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 PDGFDQ9GZP0 370 aaPredicted RBP11.02□□□□□ -0.65
HLA-B-258ENST00000640615 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.65
HLA-B-258ENST00000640615 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
HLA-B-258ENST00000640615 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
HLA-B-258ENST00000640615 GRM8O00222 908 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 MSH5O43196 834 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 GNAI2P04899 355 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 YY1P25490 414 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 CCDC191Q8NCU4 936 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 STK32BQ9NY57 414 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 MYH14Q7Z406 1995 aaKnown RBP11.01□□□□□ -0.65
HLA-B-258ENST00000640615 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
HLA-B-258ENST00000640615 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
HLA-B-258ENST00000640615 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
HLA-B-258ENST00000640615 SLC15A2Q16348 729 aa11□□□□□ -0.65
HLA-B-258ENST00000640615 CLEC4GQ6UXB4 293 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms