RNA–Protein interactions for RNA: ENST00000640178.1

SLC35A3-219, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-219ENST00000640178 TTC14Q96N46 770 aa23.55■■□□□ 1.36
SLC35A3-219ENST00000640178 IFIT2P09913 472 aaKnown RBP23.54■■□□□ 1.36
SLC35A3-219ENST00000640178 ECHDC1Q9NTX5 307 aa23.54■■□□□ 1.36
SLC35A3-219ENST00000640178 CRYBG1Q9Y4K1 1723 aa23.54■■□□□ 1.36
SLC35A3-219ENST00000640178 GADD45BO75293 160 aaPredicted RBP23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 HEG1Q9ULI3 1381 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 WDR33Q9C0J8 1336 aaKnown RBP23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 RPAP1Q9BWH6 1393 aaPredicted RBP23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 PTH1RQ03431 593 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 RUFY3Q7L099 469 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 SUCLG2Q96I99 432 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 TCHHQ07283 1943 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 SLIT3O75094 1523 aa23.53■■□□□ 1.36
SLC35A3-219ENST00000640178 CASTP20810 708 aaKnown RBP23.52■■□□□ 1.36
SLC35A3-219ENST00000640178 AACSQ86V21 672 aa23.52■■□□□ 1.36
SLC35A3-219ENST00000640178 DTNBO60941 627 aa23.52■■□□□ 1.36
SLC35A3-219ENST00000640178 HYPKQ9NX55 129 aa23.52■■□□□ 1.36
SLC35A3-219ENST00000640178 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 KAZALD1Q96I82 304 aa23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 USP48Q86UV5 1035 aa23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 ZSCAN30Q86W11 494 aa23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 RNF214Q8ND24 703 aa23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
SLC35A3-219ENST00000640178 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 GRM8O00222 908 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 GPATCH3Q96I76 525 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 OVOS2A0A0G2JMS6 1433 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 TPRNQ4KMQ1 711 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 PRPF40BQ6NWY9 871 aaKnown RBP23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 KRT28Q7Z3Y7 464 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 ERC1Q8IUD2 1116 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 LINS1Q8NG48 757 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
SLC35A3-219ENST00000640178 ZNF142P52746 1687 aaPredicted RBP23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 LARGE1O95461 756 aa23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 RUFY2Q8WXA3 655 aa23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 ADCK5Q3MIX3 580 aa23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 SIL1Q9H173 461 aa23.49■■□□□ 1.35
SLC35A3-219ENST00000640178 SIPA1L3O60292 1781 aaPredicted RBP23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 SASH1O94885 1247 aa23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 CCDC8Q9H0W5 538 aaPredicted RBP23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 DDX21Q9NR30 783 aaKnown RBP eCLIP23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 MYL6BP14649 208 aa23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 PDIA6Q15084 440 aa23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 JAKMIP1Q96N16 626 aaKnown RBP23.48■■□□□ 1.35
SLC35A3-219ENST00000640178 DDX58O95786 925 aaKnown RBP23.47■■□□□ 1.35
SLC35A3-219ENST00000640178 EAF2Q96CJ1 260 aaPredicted RBP23.47■■□□□ 1.35
SLC35A3-219ENST00000640178 PDLIM2Q96JY6 352 aa23.47■■□□□ 1.35
SLC35A3-219ENST00000640178 NPHP4O75161 1426 aaPredicted RBP23.47■■□□□ 1.35
SLC35A3-219ENST00000640178 KLHDC4Q8TBB5 520 aa23.47■■□□□ 1.35
SLC35A3-219ENST00000640178 MSNP26038 577 aaKnown RBP23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 RIC3Q7Z5B4 369 aa23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 EVI5LQ96CN4 794 aa23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 HDAC5Q9UQL6 1122 aa23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 CNPY2Q9Y2B0 182 aa23.46■■□□□ 1.35
SLC35A3-219ENST00000640178 IGKV5-2P06315 115 aa23.45■■□□□ 1.35
SLC35A3-219ENST00000640178 SYT1P21579 422 aa23.45■■□□□ 1.35
SLC35A3-219ENST00000640178 FAM227BQ96M60 508 aa23.45■■□□□ 1.35
SLC35A3-219ENST00000640178 SMC3Q9UQE7 1217 aa23.45■■□□□ 1.35
SLC35A3-219ENST00000640178 ERBB3P21860 1342 aa23.45■■□□□ 1.34
SLC35A3-219ENST00000640178 ZSCAN22P10073 491 aaPredicted RBP23.45■■□□□ 1.34
SLC35A3-219ENST00000640178 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.34
SLC35A3-219ENST00000640178 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.45■■□□□ 1.34
SLC35A3-219ENST00000640178 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 STX6O43752 255 aa23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 ZNF790Q6PG37 636 aa23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 PDRG1Q9NUG6 133 aa23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 TRPM3Q9HCF6 1732 aaPredicted RBP23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 SYAP1Q96A49 352 aaPredicted RBP23.44■■□□□ 1.34
SLC35A3-219ENST00000640178 TSPY26PQ9H489 355 aa23.43■■□□□ 1.34
SLC35A3-219ENST00000640178 NLRP2Q9NX02 1062 aa23.43■■□□□ 1.34
SLC35A3-219ENST00000640178 UTYO14607 1347 aa23.43■■□□□ 1.34
SLC35A3-219ENST00000640178 CCDC171Q6TFL3 1326 aa23.43■■□□□ 1.34
SLC35A3-219ENST00000640178 NMIQ13287 307 aaPredicted RBP23.43■■□□□ 1.34
SLC35A3-219ENST00000640178 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 NFATC2IPQ8NCF5 419 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 BOLA2Q9H3K6 86 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 KCNJ4P48050 445 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 RBM8AQ9Y5S9 174 aaKnown RBP23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 CYP46A1Q9Y6A2 500 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 C5P01031 1676 aa23.42■■□□□ 1.34
SLC35A3-219ENST00000640178 NECTIN1Q15223 517 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 XAGE3Q8WTP9 111 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 JARID2Q92833 1246 aaPredicted RBP23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 GJB2P29033 226 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 VPS53Q5VIR6 699 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 MYD88Q99836 296 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 ZSWIM6Q9HCJ5 1215 aa23.41■■□□□ 1.34
SLC35A3-219ENST00000640178 F13A1P00488 732 aa23.4■■□□□ 1.34
SLC35A3-219ENST00000640178 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
SLC35A3-219ENST00000640178 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
SLC35A3-219ENST00000640178 KDM6AO15550 1401 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms