RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
SPIN3-230ENST00000639888 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 ACTN2P35609 894 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 CEP83Q9Y592 693 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 MLECQ14165 292 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
SPIN3-230ENST00000639888 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 GOLGA1Q92805 767 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
SPIN3-230ENST00000639888 NUP160Q12769 1436 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 GEMIN8Q9NWZ8 242 aaKnown RBP12.9□□□□□ -0.34
SPIN3-230ENST00000639888 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 GNAI2P04899 355 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 OTUD6BQ8N6M0 293 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 ZNF396Q96N95 335 aaPredicted RBP12.9□□□□□ -0.34
SPIN3-230ENST00000639888 ESYT1Q9BSJ8 1104 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 KIF5CO60282 957 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 SIL1Q9H173 461 aa12.9□□□□□ -0.34
SPIN3-230ENST00000639888 CTIFO43310 598 aaKnown RBP12.89□□□□□ -0.35
SPIN3-230ENST00000639888 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
SPIN3-230ENST00000639888 PPFIBP1Q86W92 1011 aa12.89□□□□□ -0.35
SPIN3-230ENST00000639888 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
SPIN3-230ENST00000639888 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
SPIN3-230ENST00000639888 PLEKHA4Q9H4M7 779 aa12.89□□□□□ -0.35
SPIN3-230ENST00000639888 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
SPIN3-230ENST00000639888 HDXQ7Z353 690 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 ZDHHC9Q9Y397 364 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 CPLX1O14810 134 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 CTAGE5O15320 804 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 ATP2C2O75185 946 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 LMOD1P29536 600 aaPredicted RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 INPP5BP32019 993 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 FBXO18Q8NFZ0 1043 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 KIF2CQ99661 725 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 PDE1AP54750 535 aa12.88□□□□□ -0.35
SPIN3-230ENST00000639888 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
SPIN3-230ENST00000639888 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 SSBP05455 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 CPA1P15085 419 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 MAGEA9P43362 315 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 TCEANC2Q96MN5 208 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 PPFIA3O75145 1194 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 AK2P54819 239 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 DDIT3P35638 169 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 ST5P78524 1137 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 GUCY1B3Q02153 619 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 CPSF2Q9P2I0 782 aaKnown RBP12.87□□□□□ -0.35
SPIN3-230ENST00000639888 ADAM21Q9UKJ8 722 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
SPIN3-230ENST00000639888 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 ANAPC15P60006 121 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 EZRP15311 586 aaKnown RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 CLNS1AP54105 237 aaKnown RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 EIF3CLB5ME19 914 aaKnown RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 TUBB4AP04350 444 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 SLC20A2Q08357 652 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 EIF3CQ99613 913 aaKnown RBP12.86□□□□□ -0.35
SPIN3-230ENST00000639888 RAD50Q92878 1312 aa12.86□□□□□ -0.35
SPIN3-230ENST00000639888 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
SPIN3-230ENST00000639888 GNAI3P08754 354 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms