RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 ZNF417Q8TAU3 575 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 ZNF587Q96SQ5 575 aaPredicted RBP8.71□□□□□ -1.02
CCDC7-214ENST00000639453 STRN4Q9NRL3 753 aa8.71□□□□□ -1.02
CCDC7-214ENST00000639453 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
CCDC7-214ENST00000639453 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC7-214ENST00000639453 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
CCDC7-214ENST00000639453 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
CCDC7-214ENST00000639453 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
CCDC7-214ENST00000639453 SLC9A9Q8IVB4 645 aa8.69□□□□□ -1.02
CCDC7-214ENST00000639453 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
CCDC7-214ENST00000639453 PRDM6Q9NQX0 595 aa8.69□□□□□ -1.02
CCDC7-214ENST00000639453 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
CCDC7-214ENST00000639453 EML1O00423 815 aa8.68□□□□□ -1.02
CCDC7-214ENST00000639453 ATP1A2P50993 1020 aa8.68□□□□□ -1.02
CCDC7-214ENST00000639453 PSMG3-AS1Q96PY0 264 aa8.68□□□□□ -1.02
CCDC7-214ENST00000639453 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
CCDC7-214ENST00000639453 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
CCDC7-214ENST00000639453 NCOA4Q13772 614 aa8.67□□□□□ -1.02
CCDC7-214ENST00000639453 CEP63Q96MT8 703 aa8.67□□□□□ -1.02
CCDC7-214ENST00000639453 C9orf172C9J069 976 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 PIK3CDO00329 1044 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 ADH7P40394 386 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 BRD7Q9NPI1 651 aa8.66□□□□□ -1.02
CCDC7-214ENST00000639453 LILRB5O75023 590 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
CCDC7-214ENST00000639453 SFSWAPQ12872 951 aaKnown RBP8.65□□□□□ -1.02
CCDC7-214ENST00000639453 HIF1AQ16665 826 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 RSPO4Q2I0M5 234 aaPredicted RBP8.65□□□□□ -1.02
CCDC7-214ENST00000639453 NBPF11Q86T75 865 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 MICALL1Q8N3F8 863 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 TPSG1Q9NRR2 321 aa8.65□□□□□ -1.02
CCDC7-214ENST00000639453 RAD21O60216 631 aa8.64□□□□□ -1.03
CCDC7-214ENST00000639453 RAC1P63000 192 aa8.64□□□□□ -1.03
CCDC7-214ENST00000639453 SLC30A3Q99726 388 aa8.64□□□□□ -1.03
CCDC7-214ENST00000639453 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
CCDC7-214ENST00000639453 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 DYRK3O43781 588 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 NRG1Q02297 640 aaPredicted RBP8.63□□□□□ -1.03
CCDC7-214ENST00000639453 MCM6Q14566 821 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 NKAPLQ5M9Q1 402 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
CCDC7-214ENST00000639453 SFI1A8K8P3 1242 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 ALBP02768 609 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 ITGB7P26010 798 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 MDFIQ99750 246 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 ALG2Q9H553 416 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
CCDC7-214ENST00000639453 EPHA4P54764 986 aa8.61□□□□□ -1.03
CCDC7-214ENST00000639453 TBC1D8BQ0IIM8 1120 aa8.61□□□□□ -1.03
CCDC7-214ENST00000639453 GRIK4Q16099 956 aa8.61□□□□□ -1.03
CCDC7-214ENST00000639453 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
CCDC7-214ENST00000639453 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
CCDC7-214ENST00000639453 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
CCDC7-214ENST00000639453 ELNP15502 786 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 KCNQ4P56696 695 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 RAB44Q7Z6P3 723 aaPredicted RBP8.6□□□□□ -1.03
CCDC7-214ENST00000639453 BHMTQ93088 406 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 PNMA5Q96PV4 448 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 IGFLR1Q9H665 355 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
CCDC7-214ENST00000639453 NID1P14543 1247 aa8.59□□□□□ -1.03
CCDC7-214ENST00000639453 HIRAP54198 1017 aaPredicted RBP8.59□□□□□ -1.03
CCDC7-214ENST00000639453 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
CCDC7-214ENST00000639453 ARTNQ5T4W7 220 aa8.59□□□□□ -1.03
CCDC7-214ENST00000639453 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
CCDC7-214ENST00000639453 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
CCDC7-214ENST00000639453 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-214ENST00000639453 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
CCDC7-214ENST00000639453 H2AFB2P0C5Z0 115 aa8.58□□□□□ -1.04
CCDC7-214ENST00000639453 PRSS36Q5K4E3 855 aa8.58□□□□□ -1.04
CCDC7-214ENST00000639453 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
CCDC7-214ENST00000639453 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-214ENST00000639453 M0R2N6 131 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-214ENST00000639453 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 SUSD3Q96L08 255 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-214ENST00000639453 USP21Q9UK80 565 aa8.57□□□□□ -1.04
CCDC7-214ENST00000639453 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-214ENST00000639453 PCSK7Q16549 785 aa8.56□□□□□ -1.04
CCDC7-214ENST00000639453 C20orf204Q6ZNR8 217 aa8.56□□□□□ -1.04
CCDC7-214ENST00000639453 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
CCDC7-214ENST00000639453 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
CCDC7-214ENST00000639453 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
CCDC7-214ENST00000639453 TYRO3Q06418 890 aa8.55□□□□□ -1.04
CCDC7-214ENST00000639453 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
CCDC7-214ENST00000639453 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
CCDC7-214ENST00000639453 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms